Cow genome map

Conread name: Thy1-THY010122C11

Conread position: 138-365
Cow position: chr15:27280969-27281189 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 6

Conread position: 145-283
Cow position: chr15:16824933-16825072 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 126

Conread position: 145-365
Cow position: chr15:37931660-37931444 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 81

Conread position: 146-310
Cow position: chr15:4277960-4277794 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 15

Conread position: 146-362
Cow position: chr15:5527286-5527510 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 39, 125

Conread position: 147-363
Cow position: chr15:12163415-12163198 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 97

Conread position: 147-365
Cow position: chr15:18715344-18715554 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 21

Conread position: 148-297
Cow position: chr15:33770721-33770874 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 123

Conread position: 148-305
Cow position: chr15:23957807-23957968 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 123

Conread position: 148-333
Cow position: chr15:36671932-36671741 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 13

Conread position: 148-340
Cow position: chr15:11646384-11646189 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 12, 79

Conread position: 148-344
Cow position: chr15:11957645-11957845 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 45

Conread position: 148-351
Cow position: chr15:42195160-42194968 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 38

Conread position: 148-356
Cow position: chr15:31157217-31157431 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 13

Conread position: 148-361
Cow position: chr15:26421494-26421276 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 148-361
Cow position: chr15:27863219-27863000 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 20

Conread position: 148-362
Cow position: chr15:19279982-19279771 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 21

Conread position: 148-363
Cow position: chr15:10615626-10615417 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 198, 13

Conread position: 148-364
Cow position: chr15:3497172-3497377 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 71

Conread position: 148-364
Cow position: chr15:4373580-4373799 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 181
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 37, 62

Conread position: 148-364
Cow position: chr15:27732518-27732722 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 138, 37

Conread position: 148-364
Cow position: chr15:37964637-37964865 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 37, 129

Conread position: 148-365
Cow position: chr15:5722569-5722355 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 129

Conread position: 148-365
Cow position: chr15:13387184-13387408 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 78

Conread position: 148-365
Cow position: chr15:15215124-15215345 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 37, 123

Conread position: 148-365
Cow position: chr15:28236788-28236577 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 13

Conread position: 148-374
Cow position: chr15:20401799-20401580 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 60

Conread position: 149-365
Cow position: chr15:3572595-3572379 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 36, 12

Conread position: 150-315
Cow position: chr15:22854511-22854683 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 11

Conread position: 150-361
Cow position: chr15:20370350-20370142 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 20

Conread position: 150-363
Cow position: chr15:44252470-44252686 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 63

Conread position: 150-364
Cow position: chr15:37632774-37632550 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 123

Conread position: 150-365
Cow position: chr15:21836788-21837014 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 129

Conread position: 150-365
Cow position: chr15:38322949-38323155 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 150-366
Cow position: chr15:43248665-43248445 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 120

Conread position: 151-364
Cow position: chr15:33678811-33679019 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 32

Conread position: 151-365
Cow position: chr15:22939214-22939008 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 151-365
Cow position: chr15:27247609-27247838 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 151-365
Cow position: chr15:40009543-40009325 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 83

Conread position: 152-363
Cow position: chr15:4138243-4138460 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 17

Conread position: 152-364
Cow position: chr15:20117219-20117434 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 123

Conread position: 152-365
Cow position: chr15:29272299-29272516 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 13

Conread position: 153-367
Cow position: chr15:24285090-24285312 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 120

Conread position: 154-363
Cow position: chr15:43626579-43626785 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 14

Conread position: 154-365
Cow position: chr15:36782215-36782007 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 155-362
Cow position: chr15:26701966-26701754 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 79

Conread position: 155-364
Cow position: chr15:28177583-28177786 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 131, 10

Conread position: 155-365
Cow position: chr15:15707998-15707795 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 20

Conread position: 155-365
Cow position: chr15:17213563-17213777 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 15

Conread position: 156-365
Cow position: chr15:16585621-16585850 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 157-362
Cow position: chr15:53118434-53118644 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 6, 79

Conread position: 157-363
Cow position: chr15:16112515-16112728 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 158-331
Cow position: chr15:27281916-27282096 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 27, 113

Conread position: 158-354
Cow position: chr15:8937126-8937313 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 52

Conread position: 158-365
Cow position: chr15:31545238-31545024 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 112

Conread position: 159-365
Cow position: chr15:1830676-1830890 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 26, 112

Conread position: 160-364
Cow position: chr15:6628170-6627967 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 51

Conread position: 162-362
Cow position: chr15:9072311-9072111 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 111

Conread position: 162-363
Cow position: chr15:44209685-44209894 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 109

Conread position: 162-364
Cow position: chr15:7430094-7430305 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 108

Conread position: 163-363
Cow position: chr15:32287635-32287434 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 7

Conread position: 163-364
Cow position: chr15:9642549-9642758 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 110

Conread position: 169-367
Cow position: chr15:17683153-17683354 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 43

Conread position: 170-310
Cow position: chr15:50993864-50994016 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 105

Conread position: 170-364
Cow position: chr15:39363886-39363692 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 53

Conread position: 170-365
Cow position: chr15:49738919-49738722 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 101

Conread position: 171-365
Cow position: chr15:13545236-13545423 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 51

Conread position: 174-363
Cow position: chr15:47634221-47634406 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 11

Conread position: 174-364
Cow position: chr15:19403111-19403302 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 63

Conread position: 175-362
Cow position: chr15:11574090-11574281 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 11

Conread position: 175-364
Cow position: chr15:4856919-4857120 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 97

Conread position: 175-365
Cow position: chr15:45322919-45323108 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 26

Conread position: 177-365
Cow position: chr15:14020606-14020796 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 49

Conread position: 184-358
Cow position: chr15:44797670-44797847 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 87

Conread position: 185-382
Cow position: chr15:20347391-20347596 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 18, 26

Conread position: 186-358
Cow position: chr15:23140009-23139837 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 65

Conread position: 186-365
Cow position: chr15:35041730-35041545 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 85

Conread position: 189-363
Cow position: chr15:17100563-17100391 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 46

Conread position: 193-366
Cow position: chr15:26158465-26158291 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 42

Conread position: 199-366
Cow position: chr15:33976531-33976367 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 27

Conread position: 206-364
Cow position: chr15:16583541-16583387 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 212-363
Cow position: chr15:22606979-22607130 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 74, 57

Conread position: 215-364
Cow position: chr15:24977021-24976867 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 71, 53

Conread position: 217-364
Cow position: chr15:10487725-10487573 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 52

Conread position: 235-364
Cow position: chr15:13285229-13285358 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 33

Conread position: 239-365
Cow position: chr15:13846380-13846252 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 32

Show alignments to all cow chromosomes.