Cow genome map


           Conread name:
           Thy1-THY010122C11
        

               Conread position:
               138-365
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               48, 6
               

               Conread position:
               145-283
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 126
               

               Conread position:
               145-365
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               146-310
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               146-362
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               147-363
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               38, 97
               

               Conread position:
               147-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               148-297
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-305
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 123
               

               Conread position:
               148-333
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-340
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               148-344
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               148-351
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               114, 38
               

               Conread position:
               148-356
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               148-361
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               148-361
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               148-362
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               148-363
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               198, 13
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               37, 71
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               138, 37
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               37, 129
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 129
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               36, 78
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-374
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               149-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               150-315
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               150-361
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               150-363
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               150-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 123
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               150-366
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               35, 120
               

               Conread position:
               151-364
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               149, 32
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               35, 83
               

               Conread position:
               152-363
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               152-364
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               31, 123
               

               Conread position:
               152-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               153-367
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               33, 120
               

               Conread position:
               154-363
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               154-365
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               155-362
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               155-364
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               155-365
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               155-365
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               157-362
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               6, 79
               

               Conread position:
               157-363
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               158-331
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               158-354
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               158-365
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               159-365
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               160-364
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               162-362
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 111
               

               Conread position:
               162-363
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 109
               

               Conread position:
               162-364
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               163-363
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 7
               

               Conread position:
               163-364
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               169-367
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               170-310
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               170-364
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               170-365
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 101
               

               Conread position:
               171-365
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               174-363
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 11
               

               Conread position:
               174-364
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               175-362
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               175-364
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 97
               

               Conread position:
               175-365
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               177-365
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               184-358
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               102, 87
               

               Conread position:
               185-382
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               186-358
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               186-365
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               100, 85
               

               Conread position:
               189-363
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               193-366
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               199-366
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               206-364
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               212-363
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               74, 57
               

               Conread position:
               215-364
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               217-364
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 52
               

               Conread position:
               235-364
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               239-365
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 32
               
Show alignments to all cow chromosomes.