Cow genome map

Conread name: Thy1-THY010122C11

Conread position: 92-364
Cow position: chr16:3628853-3628582 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 120

Conread position: 139-364
Cow position: chr16:4875989-4875763 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 133

Conread position: 146-364
Cow position: chr16:18427172-18426949 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 20

Conread position: 147-362
Cow position: chr16:13601095-13601305 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 58

Conread position: 147-364
Cow position: chr16:32327635-32327417 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 77

Conread position: 148-285
Cow position: chr16:52222343-52222480 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 123

Conread position: 148-298
Cow position: chr16:22872385-22872534 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 89

Conread position: 148-310
Cow position: chr16:25803419-25803586 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 13

Conread position: 148-311
Cow position: chr16:45693131-45692959 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 124

Conread position: 148-319
Cow position: chr16:54426147-54425970 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 13

Conread position: 148-348
Cow position: chr16:25463760-25463554 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 125

Conread position: 148-357
Cow position: chr16:13683776-13683998 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 22

Conread position: 148-362
Cow position: chr16:4979784-4979580 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 131, 38

Conread position: 148-362
Cow position: chr16:42257434-42257219 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 125

Conread position: 148-363
Cow position: chr16:27013878-27013666 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 130, 38

Conread position: 148-364
Cow position: chr16:23025329-23025106 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 28

Conread position: 148-364
Cow position: chr16:31419429-31419209 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 15

Conread position: 148-364
Cow position: chr16:32837561-32837781 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 125

Conread position: 148-364
Cow position: chr16:51069934-51070163 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 129

Conread position: 148-365
Cow position: chr16:23990498-23990723 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 125

Conread position: 148-365
Cow position: chr16:30639320-30639105 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 138, 38

Conread position: 148-365
Cow position: chr16:34210424-34210649 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 37, 126

Conread position: 148-366
Cow position: chr16:16546057-16545835 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 90, 38

Conread position: 148-367
Cow position: chr16:23066645-23066431 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 86

Conread position: 150-313
Cow position: chr16:10303765-10303931 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 121

Conread position: 150-362
Cow position: chr16:36930336-36930553 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 35, 121

Conread position: 150-365
Cow position: chr16:25043702-25043490 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 121

Conread position: 150-365
Cow position: chr16:27005185-27004964 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 123

Conread position: 151-363
Cow position: chr16:11153209-11153422 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 120

Conread position: 151-364
Cow position: chr16:48398275-48398481 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 151-365
Cow position: chr16:15824464-15824678 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 65

Conread position: 151-366
Cow position: chr16:49169402-49169620 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 121

Conread position: 151-380
Cow position: chr16:4145045-4144814 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 10

Conread position: 152-362
Cow position: chr16:14799763-14799976 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 17

Conread position: 152-365
Cow position: chr16:820229-820015 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 101

Conread position: 152-365
Cow position: chr16:4763112-4762902 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 33, 76

Conread position: 152-365
Cow position: chr16:46253706-46253925 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 24, 122

Conread position: 153-268
Cow position: chr16:31490064-31489945 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 153-344
Cow position: chr16:29094566-29094384 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 82

Conread position: 153-362
Cow position: chr16:13195362-13195566 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 33, 83

Conread position: 153-362
Cow position: chr16:17948202-17948417 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 117

Conread position: 153-363
Cow position: chr16:43276001-43275788 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 84

Conread position: 153-367
Cow position: chr16:54515704-54515490 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 76

Conread position: 154-364
Cow position: chr16:51112898-51113112 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 90

Conread position: 154-366
Cow position: chr16:14028649-14028852 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 48

Conread position: 154-381
Cow position: chr16:53267701-53267476 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 32, 14

Conread position: 155-364
Cow position: chr16:14441867-14441655 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 54

Conread position: 155-365
Cow position: chr16:9235498-9235715 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 27

Conread position: 157-357
Cow position: chr16:48493154-48492955 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 80

Conread position: 157-363
Cow position: chr16:36911068-36911265 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 82

Conread position: 157-364
Cow position: chr16:12169716-12169926 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 13

Conread position: 157-364
Cow position: chr16:50014504-50014296 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 61

Conread position: 157-365
Cow position: chr16:5243945-5243727 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 117

Conread position: 157-365
Cow position: chr16:44973469-44973260 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 8

Conread position: 157-366
Cow position: chr16:51784754-51784952 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 157-367
Cow position: chr16:20685472-20685669 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 13

Conread position: 157-367
Cow position: chr16:55586624-55586838 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 117

Conread position: 157-392
Cow position: chr16:56082386-56082623 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 81

Conread position: 158-332
Cow position: chr16:7785117-7784936 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 8

Conread position: 158-364
Cow position: chr16:25287712-25287926 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 8, 67

Conread position: 158-367
Cow position: chr16:7152195-7152411 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 91

Conread position: 158-367
Cow position: chr16:7639965-7639758 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 128, 70

Conread position: 159-364
Cow position: chr16:30209729-30209527 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 69

Conread position: 159-365
Cow position: chr16:52219056-52218853 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 111

Conread position: 160-335
Cow position: chr16:10462549-10462723 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 24

Conread position: 161-362
Cow position: chr16:4499407-4499205 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 110

Conread position: 161-367
Cow position: chr16:3918503-3918292 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 110

Conread position: 163-359
Cow position: chr16:28111954-28112151 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 81, 12

Conread position: 164-364
Cow position: chr16:7082764-7082968 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 108

Conread position: 166-362
Cow position: chr16:37062426-37062628 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 73

Conread position: 167-366
Cow position: chr16:28816129-28816333 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 50

Conread position: 169-324
Cow position: chr16:40732181-40732023 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 48

Conread position: 170-355
Cow position: chr16:43105552-43105739 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 76, 65

Conread position: 170-361
Cow position: chr16:43850869-43851058 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 103

Conread position: 170-364
Cow position: chr16:30939697-30939498 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 68

Conread position: 170-365
Cow position: chr16:7426896-7427102 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 106

Conread position: 170-365
Cow position: chr16:33752159-33751962 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 67

Conread position: 170-366
Cow position: chr16:23472710-23472514 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 83

Conread position: 170-366
Cow position: chr16:53547627-53547823 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 116, 19

Conread position: 170-387
Cow position: chr16:5726885-5726665 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 67

Conread position: 171-365
Cow position: chr16:51880024-51880242 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 172-351
Cow position: chr16:21095527-21095713 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 21

Conread position: 172-364
Cow position: chr16:9845747-9845948 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 99

Conread position: 172-366
Cow position: chr16:18052057-18051854 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 99

Conread position: 174-361
Cow position: chr16:29510388-29510565 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 56

Conread position: 175-350
Cow position: chr16:28267055-28267237 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 48

Conread position: 175-364
Cow position: chr16:29159087-29158896 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 177

Conread position: 175-364
Cow position: chr16:41590728-41590544 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 34

Conread position: 175-365
Cow position: chr16:38905271-38905462 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 11, 61

Conread position: 175-365
Cow position: chr16:45603629-45603443 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 48

Conread position: 178-366
Cow position: chr16:32384867-32385057 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 40

Conread position: 180-367
Cow position: chr16:2308636-2308447 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 90, 5

Conread position: 182-358
Cow position: chr16:16424655-16424833 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 41

Conread position: 185-310
Cow position: chr16:20260437-20260307 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 98, 27

Conread position: 189-365
Cow position: chr16:15677502-15677321 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 80

Conread position: 190-365
Cow position: chr16:52889469-52889646 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 43

Conread position: 191-363
Cow position: chr16:15805923-15805746 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 30

Conread position: 197-329
Cow position: chr16:18949535-18949402 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 72

Conread position: 199-366
Cow position: chr16:49171480-49171647 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 87, 70

Conread position: 211-365
Cow position: chr16:11449687-11449533 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 75, 58

Conread position: 215-366
Cow position: chr16:12738249-12738094 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 53

Show alignments to all cow chromosomes.