Cow genome map


           Conread name:
           Thy1-THY010122C11
        

               Conread position:
               138-363
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               140-364
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               145-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               145-381
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               38, 68
               

               Conread position:
               146-360
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 58
               

               Conread position:
               147-365
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               147-365
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 130
               

               Conread position:
               148-258
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               148-263
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               148-291
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               148-333
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               138, 38
               

               Conread position:
               148-352
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               148-359
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               148-363
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 125
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 53
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               97, 37
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               37, 133
               

               Conread position:
               148-381
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               148-400
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               148-535
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 37
               

               Conread position:
               149-362
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 116
               

               Conread position:
               149-365
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               149-366
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               37, 14
               

               Conread position:
               150-327
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               136, 36
               

               Conread position:
               150-363
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               35, 121
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               150-366
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               131, 11
               

               Conread position:
               150-367
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               136, 77
               

               Conread position:
               151-364
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               151-366
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               151-367
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               152-345
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               152-354
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               152-364
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 118
               

               Conread position:
               154-362
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               154-362
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               154-363
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               154-363
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               154-364
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               154-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               155-363
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               7, 12
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               29, 115
               

               Conread position:
               156-380
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               157-336
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 114
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               10, 115
               

               Conread position:
               157-367
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               157-369
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               158-364
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               158-364
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               165
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               158-364
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               5, 66
               

               Conread position:
               158-367
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 78
               

               Conread position:
               159-364
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               82, 64
               

               Conread position:
               160-365
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 6
               

               Conread position:
               161-363
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               163-365
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               23, 107
               

               Conread position:
               163-366
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               170-363
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               170-363
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               15, 101
               

               Conread position:
               170-363
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               171-367
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 99
               

               Conread position:
               175-348
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               175-364
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               175-365
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               175-365
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               175-371
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               177-365
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               179-364
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               91, 53
               

               Conread position:
               182-364
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               101, 53
               

               Conread position:
               183-365
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 52
               

               Conread position:
               184-365
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               102, 84
               

               Conread position:
               185-364
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               185-365
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 90
               

               Conread position:
               186-364
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               102, 83
               

               Conread position:
               212-365
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               219-400
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 50
               

               Conread position:
               222-365
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               235-365
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               237-365
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 38
               

               Conread position:
               239-364
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               239-369
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.