Cow genome map

Conread name: Thy1-THY010122C11

Conread position: 138-363
Cow position: chr17:15450392-15450164 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 16

Conread position: 140-364
Cow position: chr17:9293786-9293555 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 129

Conread position: 145-364
Cow position: chr17:34628452-34628675 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 16

Conread position: 145-381
Cow position: chr17:27697674-27697904 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 184
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 38, 68

Conread position: 146-360
Cow position: chr17:33926099-33926316 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 58

Conread position: 147-365
Cow position: chr17:2079787-2079565 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 76

Conread position: 147-365
Cow position: chr17:7890143-7890374 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 130

Conread position: 148-258
Cow position: chr17:27257205-27257318 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 148-263
Cow position: chr17:20608571-20608452 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 148-291
Cow position: chr17:14683810-14683665 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 148-333
Cow position: chr17:28359865-28359680 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 138, 38

Conread position: 148-352
Cow position: chr17:8861158-8861367 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 19

Conread position: 148-359
Cow position: chr17:10271518-10271302 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 37, 18

Conread position: 148-363
Cow position: chr17:8279683-8279902 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 125

Conread position: 148-364
Cow position: chr17:3466852-3466641 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 37, 60

Conread position: 148-364
Cow position: chr17:25590211-25590431 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 12

Conread position: 148-364
Cow position: chr17:37414871-37415094 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 18

Conread position: 148-365
Cow position: chr17:10424104-10423871 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 53

Conread position: 148-365
Cow position: chr17:18246103-18245880 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 123

Conread position: 148-365
Cow position: chr17:23879802-23880023 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 97, 37

Conread position: 148-365
Cow position: chr17:25181120-25181344 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 21

Conread position: 148-365
Cow position: chr17:25707982-25707760 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 148-365
Cow position: chr17:32457543-32457775 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 133

Conread position: 148-381
Cow position: chr17:18815241-18815018 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 22

Conread position: 148-400
Cow position: chr17:27819328-27819071 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 78

Conread position: 148-535
Cow position: chr17:37138785-37138400 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 37

Conread position: 149-362
Cow position: chr17:144154-144367 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 116

Conread position: 149-365
Cow position: chr17:25755816-25755589 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 17

Conread position: 149-366
Cow position: chr17:34864596-34864376 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 37, 14

Conread position: 150-327
Cow position: chr17:41811834-41811660 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 36

Conread position: 150-363
Cow position: chr17:3042497-3042286 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 35, 121

Conread position: 150-365
Cow position: chr17:6624275-6624063 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 21

Conread position: 150-366
Cow position: chr17:3945177-3945396 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 131, 11

Conread position: 150-367
Cow position: chr17:11305054-11304840 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 136, 77

Conread position: 151-364
Cow position: chr17:10634038-10634251 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 39, 60

Conread position: 151-366
Cow position: chr17:32950295-32950076 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 15

Conread position: 151-367
Cow position: chr17:18495497-18495707 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 82

Conread position: 152-345
Cow position: chr17:10458918-10459111 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 17

Conread position: 152-354
Cow position: chr17:22781708-22781503 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 31

Conread position: 152-364
Cow position: chr17:23803480-23803274 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 118

Conread position: 154-362
Cow position: chr17:15363542-15363754 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 154-362
Cow position: chr17:24580278-24580492 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 16

Conread position: 154-363
Cow position: chr17:3471439-3471228 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 16

Conread position: 154-363
Cow position: chr17:26085052-26084840 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 31, 15

Conread position: 154-364
Cow position: chr17:30204678-30204461 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 89

Conread position: 154-365
Cow position: chr17:9854004-9853791 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 15

Conread position: 155-363
Cow position: chr17:23147438-23147235 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 14

Conread position: 156-365
Cow position: chr17:10308010-10308207 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 116

Conread position: 156-365
Cow position: chr17:16895287-16895489 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 7, 12

Conread position: 156-365
Cow position: chr17:18824810-18824595 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 115

Conread position: 156-380
Cow position: chr17:33999031-33999255 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 78

Conread position: 157-336
Cow position: chr17:13672052-13672235 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 73

Conread position: 157-365
Cow position: chr17:18494499-18494710 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 114

Conread position: 157-365
Cow position: chr17:20208813-20209007 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 11

Conread position: 157-365
Cow position: chr17:25740970-25740755 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 115

Conread position: 157-367
Cow position: chr17:28540045-28539840 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 11

Conread position: 157-369
Cow position: chr17:35311441-35311222 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 12

Conread position: 158-364
Cow position: chr17:11171808-11171601 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 77

Conread position: 158-364
Cow position: chr17:38276702-38276497 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 27, 12

Conread position: 158-364
Cow position: chr17:39012742-39012524 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 5, 66

Conread position: 158-367
Cow position: chr17:242653-242439 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 78

Conread position: 159-364
Cow position: chr17:7698066-7697862 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 64

Conread position: 160-365
Cow position: chr17:8926203-8926415 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 6

Conread position: 161-363
Cow position: chr17:20839546-20839753 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 68

Conread position: 163-365
Cow position: chr17:10790326-10790117 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 23, 107

Conread position: 163-366
Cow position: chr17:35991108-35990900 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 108

Conread position: 170-363
Cow position: chr17:4606960-4606777 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 170-363
Cow position: chr17:16307382-16307187 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 15, 101

Conread position: 170-363
Cow position: chr17:19755897-19756095 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 106

Conread position: 171-367
Cow position: chr17:5380973-5380770 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 99

Conread position: 175-348
Cow position: chr17:34207820-34207998 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 62

Conread position: 175-364
Cow position: chr17:7132452-7132649 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 62

Conread position: 175-365
Cow position: chr17:21419435-21419237 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 98

Conread position: 175-365
Cow position: chr17:22564180-22563988 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 62

Conread position: 175-371
Cow position: chr17:21697735-21697531 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 62

Conread position: 177-365
Cow position: chr17:17452608-17452797 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 8, 31

Conread position: 179-364
Cow position: chr17:1327978-1328165 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 91, 53

Conread position: 182-364
Cow position: chr17:20835586-20835399 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 101, 53

Conread position: 183-365
Cow position: chr17:33052848-33052668 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 52

Conread position: 184-365
Cow position: chr17:36817929-36817747 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 84

Conread position: 185-364
Cow position: chr17:11837407-11837228 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 91, 14

Conread position: 185-365
Cow position: chr17:15684499-15684310 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 90

Conread position: 186-364
Cow position: chr17:27780837-27780660 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 102, 83

Conread position: 212-365
Cow position: chr17:18173848-18173999 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 21

Conread position: 219-400
Cow position: chr17:5360613-5360793 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 50

Conread position: 222-365
Cow position: chr17:2270706-2270573 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 235-365
Cow position: chr17:41995734-41995597 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 34

Conread position: 237-365
Cow position: chr17:30999708-30999581 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 38

Conread position: 239-364
Cow position: chr17:21323222-21323103 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 239-369
Cow position: chr17:20055602-20055474 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.