Cow genome map


           Conread name:
           Thy1-THY010122C11
        

               Conread position:
               144-352
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 128
               

               Conread position:
               146-284
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               146-358
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               146-366
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 125
               

               Conread position:
               147-364
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               147-365
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               147-365
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               148-268
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               148-309
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               133, 62
               

               Conread position:
               148-338
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               148-362
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               148-362
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               148-363
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               37, 75
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 118
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               138, 13
               

               Conread position:
               148-366
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               148-381
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               150-343
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               150-360
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 87
               

               Conread position:
               150-364
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 121
               

               Conread position:
               150-364
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               35, 94
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               151-363
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               151-367
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               35, 120
               

               Conread position:
               152-284
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               152-360
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               33, 118
               

               Conread position:
               152-363
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 86
               

               Conread position:
               152-364
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               152-367
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 83
               

               Conread position:
               153-361
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 10
               

               Conread position:
               153-364
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               153-366
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 118
               

               Conread position:
               154-364
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               154-365
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               70, 75
               

               Conread position:
               155-338
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               155-365
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               156-363
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               156-364
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               29, 114
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               6, 22
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               158-310
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 112
               

               Conread position:
               158-365
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               159-365
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               162-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               10, 118
               

               Conread position:
               163-369
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               166-368
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               167-291
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               167-365
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               167-365
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               170-279
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               170-364
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               171-366
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               14, 100
               

               Conread position:
               172-368
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               175-365
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               10, 67
               

               Conread position:
               176-362
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               179-363
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               182-362
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               42, 47
               

               Conread position:
               185-365
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               185-381
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               186-364
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               100, 23
               

               Conread position:
               189-363
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               191-364
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               206-363
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               212-365
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 52
               

               Conread position:
               213-367
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               5, 59
               

               Conread position:
               219-363
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               232-365
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               53, 37
               

               Conread position:
               238-364
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 23
               
Show alignments to all cow chromosomes.