Cow genome map

Conread name: Thy1-THY010122C11

Conread position: 144-343
Cow position: chr21:6316267-6316050 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 146-365
Cow position: chr21:28944316-28944536 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 39, 32

Conread position: 146-368
Cow position: chr21:35997223-35996998 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 8

Conread position: 146-387
Cow position: chr21:48291005-48291227 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 148-363
Cow position: chr21:23786077-23785859 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 19

Conread position: 148-363
Cow position: chr21:32665730-32665942 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 40

Conread position: 148-364
Cow position: chr21:1059125-1058905 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 22

Conread position: 148-364
Cow position: chr21:8289585-8289812 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 126

Conread position: 148-364
Cow position: chr21:47823228-47823443 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 26

Conread position: 148-364
Cow position: chr21:49662076-49662289 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 81

Conread position: 148-365
Cow position: chr21:32574766-32574561 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 75, 18

Conread position: 148-365
Cow position: chr21:44093829-44093607 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 18

Conread position: 148-387
Cow position: chr21:25800444-25800214 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 37, 90

Conread position: 150-362
Cow position: chr21:5426019-5425811 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 133, 36

Conread position: 150-364
Cow position: chr21:30990234-30990440 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 18

Conread position: 150-364
Cow position: chr21:46242192-46242411 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 18

Conread position: 150-365
Cow position: chr21:31662509-31662288 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 11

Conread position: 150-365
Cow position: chr21:34565166-34565385 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 84

Conread position: 150-366
Cow position: chr21:4276553-4276765 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 137, 20

Conread position: 151-291
Cow position: chr21:41514849-41514706 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 12

Conread position: 151-361
Cow position: chr21:33997185-33997390 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 10

Conread position: 151-364
Cow position: chr21:8985590-8985378 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 15

Conread position: 151-364
Cow position: chr21:12617181-12616968 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 18

Conread position: 151-364
Cow position: chr21:15976676-15976470 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 19

Conread position: 151-364
Cow position: chr21:22861044-22860830 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 16

Conread position: 151-364
Cow position: chr21:27229749-27229966 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 25

Conread position: 151-365
Cow position: chr21:15911445-15911228 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 87

Conread position: 152-363
Cow position: chr21:42135574-42135794 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 98

Conread position: 152-365
Cow position: chr21:3381040-3381253 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 14

Conread position: 152-365
Cow position: chr21:4098914-4098703 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 119

Conread position: 153-361
Cow position: chr21:23449618-23449405 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 33, 64

Conread position: 153-365
Cow position: chr21:28993578-28993798 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 32, 80

Conread position: 154-364
Cow position: chr21:14464623-14464406 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 22

Conread position: 154-365
Cow position: chr21:16166601-16166805 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 54

Conread position: 154-365
Cow position: chr21:28997858-28998078 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 31, 118

Conread position: 155-313
Cow position: chr21:18782307-18782145 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 118

Conread position: 155-335
Cow position: chr21:41583312-41583127 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 15

Conread position: 155-365
Cow position: chr21:3813442-3813655 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 63

Conread position: 156-363
Cow position: chr21:19363421-19363634 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 116

Conread position: 156-364
Cow position: chr21:38900816-38900602 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 129, 79

Conread position: 156-365
Cow position: chr21:18790519-18790728 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 81

Conread position: 157-311
Cow position: chr21:41595753-41595592 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 16

Conread position: 157-362
Cow position: chr21:33947212-33947416 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 48

Conread position: 157-364
Cow position: chr21:12973207-12973424 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 122

Conread position: 159-364
Cow position: chr21:14452270-14452058 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 19

Conread position: 162-365
Cow position: chr21:42053232-42053437 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 167
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 23, 110

Conread position: 163-363
Cow position: chr21:36795634-36795433 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 74

Conread position: 170-354
Cow position: chr21:39401620-39401433 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 67

Conread position: 170-364
Cow position: chr21:25286540-25286338 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 101

Conread position: 170-365
Cow position: chr21:36819186-36819385 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 101

Conread position: 170-366
Cow position: chr21:47861222-47861021 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 171-338
Cow position: chr21:6058616-6058785 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 46

Conread position: 175-365
Cow position: chr21:28477645-28477449 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 62

Conread position: 175-365
Cow position: chr21:32237316-32237125 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 62

Conread position: 175-367
Cow position: chr21:31253565-31253362 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 62

Conread position: 176-365
Cow position: chr21:23478697-23478891 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 9, 96

Conread position: 183-367
Cow position: chr21:46829259-46829442 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 41

Conread position: 185-364
Cow position: chr21:24714666-24714482 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 88

Conread position: 194-364
Cow position: chr21:48263123-48262960 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 31

Conread position: 197-365
Cow position: chr21:41040869-41040695 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 70

Conread position: 234-365
Cow position: chr21:5153579-5153445 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 35

Conread position: 235-365
Cow position: chr21:13256765-13256632 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 115
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 34

Show alignments to all cow chromosomes.