Cow genome map
| Conread name: | Thy1-THY010122C11 |
| Conread position: | 147-358 |
| Cow position: | chr23:2531360-2531567 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 147-364 |
| Cow position: | chr23:37224080-37224299 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 80 |
| Conread position: | 147-365 |
| Cow position: | chr23:40862332-40862105 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 20, 125 |
| Conread position: | 147-368 |
| Cow position: | chr23:37190598-37190813 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 211, 46 |
| Conread position: | 148-345 |
| Cow position: | chr23:23470922-23470729 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 138, 38 |
| Conread position: | 148-351 |
| Cow position: | chr23:32662564-32662355 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 148-361 |
| Cow position: | chr23:21659930-21659707 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 148-362 |
| Cow position: | chr23:19636274-19636495 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 148-362 |
| Cow position: | chr23:30307893-30307677 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 130, 30 |
| Conread position: | 148-363 |
| Cow position: | chr23:20171563-20171343 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 90 |
| Conread position: | 148-364 |
| Cow position: | chr23:14126554-14126341 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 148-364 |
| Cow position: | chr23:25407463-25407685 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 148-364 |
| Cow position: | chr23:30210357-30210577 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 148-365 |
| Cow position: | chr23:16237265-16237494 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 148-365 |
| Cow position: | chr23:22660598-22660804 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 148-365 |
| Cow position: | chr23:26067095-26066886 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 5, 20 |
| Conread position: | 148-365 |
| Cow position: | chr23:41589931-41590143 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 13 |
| Conread position: | 148-367 |
| Cow position: | chr23:31607166-31607395 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-382 |
| Cow position: | chr23:645312-645079 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 149-361 |
| Cow position: | chr23:4980558-4980774 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 150-362 |
| Cow position: | chr23:18492150-18491936 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 94, 16 |
| Conread position: | 151-332 |
| Cow position: | chr23:30773695-30773881 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 151-365 |
| Cow position: | chr23:14164417-14164634 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 152-365 |
| Cow position: | chr23:12369402-12369613 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 153-365 |
| Cow position: | chr23:16609826-16610044 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 154-367 |
| Cow position: | chr23:5389679-5389466 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 155-365 |
| Cow position: | chr23:40781303-40781092 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 156-363 |
| Cow position: | chr23:14838764-14838967 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 158-346 |
| Cow position: | chr23:5723522-5723328 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 158-364 |
| Cow position: | chr23:36146482-36146688 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 162-364 |
| Cow position: | chr23:20752986-20752779 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 163-365 |
| Cow position: | chr23:3745580-3745369 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 169-366 |
| Cow position: | chr23:9641456-9641653 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 170-359 |
| Cow position: | chr23:1923872-1924064 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 170-365 |
| Cow position: | chr23:12408545-12408745 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 170-365 |
| Cow position: | chr23:25378619-25378422 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 170-367 |
| Cow position: | chr23:29242913-29242710 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 170-368 |
| Cow position: | chr23:10416456-10416660 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 106 |
| Conread position: | 171-346 |
| Cow position: | chr23:32148372-32148551 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 171-364 |
| Cow position: | chr23:22588301-22588503 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 175-365 |
| Cow position: | chr23:9711623-9711823 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 178-365 |
| Cow position: | chr23:9652525-9652701 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 185-364 |
| Cow position: | chr23:3140811-3140631 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 185-365 |
| Cow position: | chr23:21336539-21336723 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 186-364 |
| Cow position: | chr23:13359759-13359586 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 162, 46 |
| Conread position: | 189-363 |
| Cow position: | chr23:11564400-11564574 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 97, 26 |
| Conread position: | 190-387 |
| Cow position: | chr23:8930182-8930368 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 219-365 |
| Cow position: | chr23:20585801-20585946 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 234-365 |
| Cow position: | chr23:35362874-35363007 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 235-364 |
| Cow position: | chr23:7937646-7937773 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.