Cow genome map


           Conread name:
           Thy1-THY010122C11
        

               Conread position:
               139-365
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 132
               

               Conread position:
               144-365
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               145-364
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               146-365
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               147-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               147-366
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               140, 19
               

               Conread position:
               148-268
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               148-285
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 122
               

               Conread position:
               148-310
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-353
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               148-354
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               148-363
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               40, 62
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 87
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 38
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 169
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               150-300
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               151-363
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               151-364
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 19
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               152-345
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               152-363
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               134, 34
               

               Conread position:
               152-363
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               33, 85
               

               Conread position:
               153-364
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               154-360
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               154-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               155-364
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               155-382
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               130, 27
               

               Conread position:
               156-367
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               157-363
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               157-364
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 26
               

               Conread position:
               157-364
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               12, 98
               

               Conread position:
               157-364
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               157-367
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               158-288
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               28, 113
               

               Conread position:
               159-365
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               160-361
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               126, 23
               

               Conread position:
               160-365
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               25, 166
               

               Conread position:
               169-362
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               170-365
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               170-365
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               171-364
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               172-381
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               177-365
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               178-365
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               7, 93
               

               Conread position:
               180-362
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               186-364
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               186-393
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               95, 85
               

               Conread position:
               189-365
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               97, 79
               

               Conread position:
               199-364
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 70
               

               Conread position:
               213-360
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               222-366
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               223-365
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               235-367
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               235-367
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 36
               

               Conread position:
               239-365
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.