Cow genome map
| Conread name: | Thy1-THY010122C11 |
| Conread position: | 145-362 |
| Cow position: | chr25:8512105-8512329 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 126 |
| Conread position: | 147-348 |
| Cow position: | chr25:12239162-12239369 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 147-364 |
| Cow position: | chr25:33691539-33691316 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 148-260 |
| Cow position: | chr25:16560193-16560308 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 148-357 |
| Cow position: | chr25:17365279-17365487 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 148-361 |
| Cow position: | chr25:14570354-14570135 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 37, 177 |
| Conread position: | 148-363 |
| Cow position: | chr25:40957005-40957223 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 148-365 |
| Cow position: | chr25:8560846-8560631 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 148-365 |
| Cow position: | chr25:8576669-8576455 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 138, 13 |
| Conread position: | 148-365 |
| Cow position: | chr25:23410646-23410425 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 148-365 |
| Cow position: | chr25:24136457-24136673 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 138, 38 |
| Conread position: | 148-365 |
| Cow position: | chr25:24405754-24405974 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 148-366 |
| Cow position: | chr25:22736098-22735886 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 151-364 |
| Cow position: | chr25:5514990-5514769 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 151-365 |
| Cow position: | chr25:9957061-9957270 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 153-368 |
| Cow position: | chr25:18000553-18000757 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 154-364 |
| Cow position: | chr25:13333401-13333186 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 154-364 |
| Cow position: | chr25:17566564-17566350 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 155-364 |
| Cow position: | chr25:12234786-12234995 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 156-365 |
| Cow position: | chr25:1838213-1838002 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 156-365 |
| Cow position: | chr25:10012071-10012287 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 156-365 |
| Cow position: | chr25:12204447-12204232 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 119 |
| Conread position: | 157-364 |
| Cow position: | chr25:36026982-36026770 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 157-365 |
| Cow position: | chr25:25961935-25961726 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 160-361 |
| Cow position: | chr25:14467109-14467319 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 163-367 |
| Cow position: | chr25:27504210-27504424 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 170-361 |
| Cow position: | chr25:6255976-6256172 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 170-365 |
| Cow position: | chr25:20085244-20085049 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 65 |
| Conread position: | 175-306 |
| Cow position: | chr25:32606366-32606505 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 176-350 |
| Cow position: | chr25:16007748-16007566 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 95 |
| Conread position: | 185-367 |
| Cow position: | chr25:21894943-21895126 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 189-365 |
| Cow position: | chr25:26238810-26238633 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 97, 35 |
| Conread position: | 207-365 |
| Cow position: | chr25:22909922-22910082 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 235-365 |
| Cow position: | chr25:15368574-15368440 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.