Cow genome map
| Conread name: | Thy1-THY010122C11 |
| Conread position: | 113-365 |
| Cow position: | chr26:29353470-29353730 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 127-365 |
| Cow position: | chr26:17675711-17675949 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 139-364 |
| Cow position: | chr26:23272794-23272565 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 145-364 |
| Cow position: | chr26:17204142-17204357 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 145-365 |
| Cow position: | chr26:33745924-33745694 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 147-361 |
| Cow position: | chr26:8186653-8186435 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 147-364 |
| Cow position: | chr26:6475428-6475646 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 147-365 |
| Cow position: | chr26:33212364-33212586 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 148-293 |
| Cow position: | chr26:27585775-27585627 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 148-330 |
| Cow position: | chr26:3019416-3019612 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 148-340 |
| Cow position: | chr26:19110912-19110708 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 148-363 |
| Cow position: | chr26:9632370-9632586 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 148-363 |
| Cow position: | chr26:12669198-12668981 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 148-365 |
| Cow position: | chr26:9666408-9666626 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 148-365 |
| Cow position: | chr26:20129672-20129894 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-379 |
| Cow position: | chr26:17289206-17288972 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 149-364 |
| Cow position: | chr26:4747858-4748076 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 150-362 |
| Cow position: | chr26:2769841-2770055 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 35, 73 |
| Conread position: | 150-367 |
| Cow position: | chr26:782934-783155 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 136, 40 |
| Conread position: | 151-354 |
| Cow position: | chr26:25526244-25526038 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 151-359 |
| Cow position: | chr26:33227809-33227593 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 152-320 |
| Cow position: | chr26:14924480-14924311 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 152-365 |
| Cow position: | chr26:19769088-19769304 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 154-362 |
| Cow position: | chr26:18692417-18692217 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 154-363 |
| Cow position: | chr26:21992098-21991895 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 154-364 |
| Cow position: | chr26:16166921-16167131 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 156-310 |
| Cow position: | chr26:30605367-30605527 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 157-365 |
| Cow position: | chr26:8504257-8504039 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 157-381 |
| Cow position: | chr26:9867123-9867350 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 160-367 |
| Cow position: | chr26:2246944-2246728 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 162-365 |
| Cow position: | chr26:12807530-12807735 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 73 |
| Conread position: | 163-365 |
| Cow position: | chr26:30254643-30254853 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 116 |
| Conread position: | 166-366 |
| Cow position: | chr26:7103048-7103256 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 167-363 |
| Cow position: | chr26:8811113-8810915 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 175-364 |
| Cow position: | chr26:18918104-18918289 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 177-364 |
| Cow position: | chr26:11263614-11263418 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 60 |
| Conread position: | 185-365 |
| Cow position: | chr26:6323627-6323446 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 185-365 |
| Cow position: | chr26:8277604-8277791 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 62 |
| Conread position: | 186-354 |
| Cow position: | chr26:21339787-21339617 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 217-362 |
| Cow position: | chr26:10814140-10813995 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 52 |
| Conread position: | 229-363 |
| Cow position: | chr26:12216766-12216635 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 232-354 |
| Cow position: | chr26:19333391-19333513 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 233-365 |
| Cow position: | chr26:4293112-4293239 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.