Cow genome map

Conread name: Thy1-THY010122C11

Conread position: 98-365
Cow position: chr4:27291929-27292202 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 139

Conread position: 131-354
Cow position: chr4:9547964-9547747 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 17

Conread position: 137-383
Cow position: chr4:61271644-61271895 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 32

Conread position: 139-364
Cow position: chr4:5797949-5797731 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 146, 47

Conread position: 145-363
Cow position: chr4:27371881-27372099 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 125

Conread position: 146-365
Cow position: chr4:58512585-58512807 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 19

Conread position: 146-381
Cow position: chr4:47773663-47773892 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 85

Conread position: 147-342
Cow position: chr4:21365384-21365185 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 124

Conread position: 147-352
Cow position: chr4:46861618-46861822 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 133

Conread position: 147-360
Cow position: chr4:21259194-21258979 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 99

Conread position: 147-361
Cow position: chr4:33030527-33030318 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 87

Conread position: 147-363
Cow position: chr4:59008394-59008611 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 19

Conread position: 148-278
Cow position: chr4:41154622-41154491 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 121

Conread position: 148-293
Cow position: chr4:23166882-23166735 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 76

Conread position: 148-339
Cow position: chr4:39767328-39767128 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 21

Conread position: 148-352
Cow position: chr4:41602823-41602618 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 59

Conread position: 148-352
Cow position: chr4:65406391-65406592 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 138, 38

Conread position: 148-362
Cow position: chr4:12697614-12697407 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 148-362
Cow position: chr4:62411855-62411632 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 18

Conread position: 148-363
Cow position: chr4:65116225-65116454 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 128

Conread position: 148-363
Cow position: chr4:65841791-65842003 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 131, 38

Conread position: 148-364
Cow position: chr4:45919012-45918788 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 74

Conread position: 148-365
Cow position: chr4:18439591-18439816 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 148-365
Cow position: chr4:27561371-27561153 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 37

Conread position: 148-365
Cow position: chr4:36813352-36813129 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 54

Conread position: 148-365
Cow position: chr4:40823139-40823358 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 50, 38

Conread position: 148-365
Cow position: chr4:46082915-46083139 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 63

Conread position: 148-366
Cow position: chr4:22115583-22115362 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 148-366
Cow position: chr4:31172652-31172426 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 123

Conread position: 148-367
Cow position: chr4:30131316-30131117 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 149-278
Cow position: chr4:23758781-23758651 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 122

Conread position: 149-364
Cow position: chr4:61624613-61624833 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 47

Conread position: 150-352
Cow position: chr4:23311280-23311495 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 210

Conread position: 150-365
Cow position: chr4:58834432-58834649 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 35, 25

Conread position: 151-349
Cow position: chr4:36945222-36945419 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 35, 78

Conread position: 151-364
Cow position: chr4:28377687-28377892 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 35, 79

Conread position: 151-365
Cow position: chr4:10968416-10968628 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 59

Conread position: 151-365
Cow position: chr4:37915364-37915573 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 86

Conread position: 151-365
Cow position: chr4:39128509-39128286 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 87

Conread position: 151-365
Cow position: chr4:59785293-59785074 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 82

Conread position: 151-367
Cow position: chr4:27276571-27276785 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 120

Conread position: 151-367
Cow position: chr4:69509266-69509053 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 34

Conread position: 152-362
Cow position: chr4:46591638-46591420 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 85

Conread position: 152-364
Cow position: chr4:6792408-6792199 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 152-365
Cow position: chr4:25972871-25972656 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 15, 96

Conread position: 153-279
Cow position: chr4:63417952-63418078 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 20

Conread position: 153-307
Cow position: chr4:59719607-59719448 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 119

Conread position: 153-363
Cow position: chr4:45114633-45114847 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 5, 16

Conread position: 153-364
Cow position: chr4:22528414-22528630 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 153-364
Cow position: chr4:26541710-26541488 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 13

Conread position: 154-364
Cow position: chr4:59871451-59871251 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 155-331
Cow position: chr4:68634930-68634754 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 131, 33

Conread position: 155-363
Cow position: chr4:8650204-8649999 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 131, 31

Conread position: 155-365
Cow position: chr4:2121427-2121639 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 53

Conread position: 155-365
Cow position: chr4:9845888-9845678 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 155-392
Cow position: chr4:5553817-5554062 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 117

Conread position: 156-304
Cow position: chr4:50769795-50769950 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 60

Conread position: 156-363
Cow position: chr4:44451489-44451289 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 11

Conread position: 156-365
Cow position: chr4:58947943-58948155 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 52

Conread position: 156-367
Cow position: chr4:19307228-19307010 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 11

Conread position: 157-284
Cow position: chr4:63784148-63784281 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 157-362
Cow position: chr4:25906360-25906564 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 28, 46

Conread position: 157-381
Cow position: chr4:48499805-48499588 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 28, 41

Conread position: 158-362
Cow position: chr4:10992231-10992443 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 70

Conread position: 158-366
Cow position: chr4:24415253-24415043 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 128, 28

Conread position: 159-364
Cow position: chr4:16339633-16339835 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 75

Conread position: 162-363
Cow position: chr4:14159163-14159365 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 160
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 23, 110

Conread position: 166-363
Cow position: chr4:21073193-21073390 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 105

Conread position: 166-365
Cow position: chr4:23381851-23382049 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 79, 17

Conread position: 167-365
Cow position: chr4:63119279-63119474 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 108

Conread position: 168-362
Cow position: chr4:41301033-41301231 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 69

Conread position: 170-368
Cow position: chr4:4084495-4084691 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 26

Conread position: 171-362
Cow position: chr4:7213628-7213827 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 14, 88

Conread position: 173-310
Cow position: chr4:6133924-6133783 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 96

Conread position: 175-358
Cow position: chr4:53832996-53832809 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 100, 48

Conread position: 175-363
Cow position: chr4:42232608-42232423 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 62

Conread position: 175-364
Cow position: chr4:38999377-38999184 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 175-364
Cow position: chr4:46597328-46597140 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 98

Conread position: 175-365
Cow position: chr4:19561634-19561451 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 62

Conread position: 178-365
Cow position: chr4:961714-961906 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 95

Conread position: 178-365
Cow position: chr4:1495457-1495643 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 93

Conread position: 179-365
Cow position: chr4:42266806-42266985 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 47

Conread position: 180-366
Cow position: chr4:51408031-51408207 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 197-364
Cow position: chr4:35930358-35930187 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 74

Conread position: 199-364
Cow position: chr4:19142217-19142046 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 69

Conread position: 206-364
Cow position: chr4:48284008-48283850 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 63

Conread position: 208-365
Cow position: chr4:6630375-6630534 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 80, 63

Conread position: 211-365
Cow position: chr4:61304507-61304667 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 25

Conread position: 215-363
Cow position: chr4:24187705-24187860 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 54

Conread position: 235-367
Cow position: chr4:63813416-63813547 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.