Cow genome map

Conread name: Thy1-THY010122C11

Conread position: 145-381
Cow position: chr5:34916149-34915915 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 40

Conread position: 146-350
Cow position: chr5:24361544-24361338 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 43

Conread position: 146-361
Cow position: chr5:39710854-39710630 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 71

Conread position: 146-365
Cow position: chr5:41229717-41229502 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 139, 15

Conread position: 147-284
Cow position: chr5:63188314-63188450 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 99

Conread position: 147-310
Cow position: chr5:3752867-3752710 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 23

Conread position: 147-365
Cow position: chr5:72173037-72172813 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 38, 60

Conread position: 148-349
Cow position: chr5:31561544-31561341 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 124

Conread position: 148-358
Cow position: chr5:29505119-29504906 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 87

Conread position: 148-360
Cow position: chr5:6896116-6896332 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 148-361
Cow position: chr5:23366756-23366976 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 59

Conread position: 148-363
Cow position: chr5:48143775-48143999 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 148-364
Cow position: chr5:1276455-1276685 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 35, 18

Conread position: 148-364
Cow position: chr5:66831703-66831923 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 175

Conread position: 148-364
Cow position: chr5:70581886-70582107 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 10, 23

Conread position: 148-365
Cow position: chr5:28946052-28946269 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 130

Conread position: 148-365
Cow position: chr5:37713887-37714115 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 123

Conread position: 148-365
Cow position: chr5:65924682-65924909 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 13

Conread position: 148-366
Cow position: chr5:41604635-41604401 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 132

Conread position: 148-367
Cow position: chr5:22839462-22839684 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 37, 105

Conread position: 148-374
Cow position: chr5:17028102-17027875 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 37, 13

Conread position: 150-362
Cow position: chr5:61488101-61488319 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 35, 11

Conread position: 150-363
Cow position: chr5:1343846-1344067 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 35, 121

Conread position: 150-364
Cow position: chr5:4631127-4630918 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 11

Conread position: 150-364
Cow position: chr5:14154158-14153934 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 35, 123

Conread position: 150-364
Cow position: chr5:56524176-56523964 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 21

Conread position: 150-365
Cow position: chr5:10789669-10789888 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 83

Conread position: 150-365
Cow position: chr5:12803518-12803285 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 15

Conread position: 150-365
Cow position: chr5:18090730-18090517 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 11

Conread position: 150-366
Cow position: chr5:40039764-40039982 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 37, 15

Conread position: 150-367
Cow position: chr5:30332953-30332732 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 126

Conread position: 151-354
Cow position: chr5:32282342-32282131 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 15

Conread position: 151-361
Cow position: chr5:23640989-23641198 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 10

Conread position: 151-362
Cow position: chr5:52000227-52000011 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 10

Conread position: 151-365
Cow position: chr5:27615522-27615304 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 119

Conread position: 151-365
Cow position: chr5:34921832-34922045 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 19

Conread position: 151-365
Cow position: chr5:37646079-37645863 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 119, 84

Conread position: 151-365
Cow position: chr5:45225817-45226034 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 36, 89

Conread position: 151-381
Cow position: chr5:31786253-31786026 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 59

Conread position: 152-309
Cow position: chr5:73526385-73526222 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 93

Conread position: 152-364
Cow position: chr5:22934446-22934666 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 55

Conread position: 152-364
Cow position: chr5:30487247-30487038 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 89

Conread position: 152-364
Cow position: chr5:41636876-41636663 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 51

Conread position: 152-364
Cow position: chr5:50821787-50821579 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 15

Conread position: 152-365
Cow position: chr5:9430458-9430669 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 15

Conread position: 152-366
Cow position: chr5:64399018-64398793 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 15

Conread position: 154-365
Cow position: chr5:20974442-20974654 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 31, 13

Conread position: 155-300
Cow position: chr5:39181908-39182056 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 54

Conread position: 155-311
Cow position: chr5:59356994-59356830 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 116

Conread position: 155-348
Cow position: chr5:49559167-49558974 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 12

Conread position: 155-361
Cow position: chr5:35209473-35209682 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 85

Conread position: 155-363
Cow position: chr5:64758769-64758972 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 13

Conread position: 155-364
Cow position: chr5:16509098-16508886 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 15

Conread position: 155-364
Cow position: chr5:29560409-29560199 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 131, 12

Conread position: 156-365
Cow position: chr5:36855208-36855002 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 82

Conread position: 156-367
Cow position: chr5:56385231-56385016 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 29, 14

Conread position: 157-336
Cow position: chr5:66281407-66281230 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 31

Conread position: 157-365
Cow position: chr5:72344137-72344352 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 157-367
Cow position: chr5:45940613-45940818 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 72

Conread position: 158-365
Cow position: chr5:34528555-34528351 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 56

Conread position: 159-310
Cow position: chr5:33265458-33265602 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 75

Conread position: 159-364
Cow position: chr5:65593872-65593670 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 16

Conread position: 161-365
Cow position: chr5:19905270-19905488 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 115

Conread position: 162-364
Cow position: chr5:58856100-58855894 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 76

Conread position: 162-368
Cow position: chr5:34184226-34184006 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 116

Conread position: 163-351
Cow position: chr5:46294669-46294863 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 84

Conread position: 163-365
Cow position: chr5:33467048-33467251 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 166-350
Cow position: chr5:25899881-25900065 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 44

Conread position: 166-365
Cow position: chr5:27155016-27154812 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 60

Conread position: 167-363
Cow position: chr5:26099387-26099579 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 41

Conread position: 167-364
Cow position: chr5:62026956-62027156 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 63

Conread position: 170-364
Cow position: chr5:3058664-3058470 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 38

Conread position: 170-364
Cow position: chr5:9090033-9090233 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 66

Conread position: 171-364
Cow position: chr5:14538671-14538859 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 14, 99

Conread position: 171-365
Cow position: chr5:43329706-43329903 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 16, 100

Conread position: 175-365
Cow position: chr5:14832640-14832818 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 11

Conread position: 175-365
Cow position: chr5:26990375-26990183 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 62

Conread position: 175-365
Cow position: chr5:69773550-69773361 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 94, 0

Conread position: 175-366
Cow position: chr5:57737087-57736903 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 51

Conread position: 175-381
Cow position: chr5:56753711-56753500 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 11, 104

Conread position: 177-363
Cow position: chr5:26046316-26046125 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 94

Conread position: 177-371
Cow position: chr5:55176871-55176670 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 63

Conread position: 182-364
Cow position: chr5:66257612-66257433 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 50

Conread position: 185-364
Cow position: chr5:503946-504119 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 101, 41

Conread position: 185-365
Cow position: chr5:37366872-37366687 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 50

Conread position: 186-364
Cow position: chr5:40759946-40759770 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 111, 50

Conread position: 189-367
Cow position: chr5:50864331-50864154 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 21

Conread position: 190-374
Cow position: chr5:3649490-3649683 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 80

Conread position: 203-365
Cow position: chr5:66280838-66281002 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 83, 68

Conread position: 213-363
Cow position: chr5:20779443-20779590 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 214-365
Cow position: chr5:31604692-31604842 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 55

Conread position: 235-348
Cow position: chr5:17869628-17869513 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 34

Conread position: 244-363
Cow position: chr5:4280374-4280255 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 25

Show alignments to all cow chromosomes.