Cow genome map


           Conread name:
           Thy1-THY010122C11
        

               Conread position:
               119-338
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               10, 162
               

               Conread position:
               145-357
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 126
               

               Conread position:
               145-386
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               147-365
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               147-367
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               41, 113
               

               Conread position:
               147-367
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               148-268
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-275
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 125
               

               Conread position:
               148-324
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               65, 38
               

               Conread position:
               148-337
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               138, 18
               

               Conread position:
               148-362
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               148-363
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 12
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               37, 87
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               37, 124
               

               Conread position:
               148-364
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               138, 34
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-365
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               148-366
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               148-366
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               148-366
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               148-366
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               148-366
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               38, 123
               

               Conread position:
               148-367
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               148-367
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-368
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               148-381
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               148-382
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               148-386
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               149-278
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               149-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               150-328
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               33, 122
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               150-365
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               120, 40
               

               Conread position:
               151-260
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               151-359
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               151-364
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               151-365
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 63
               

               Conread position:
               152-324
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               152-381
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               153-364
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               153-365
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               153-365
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 71
               

               Conread position:
               154-362
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               154-364
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               154-365
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               132, 13
               

               Conread position:
               154-365
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 121
               

               Conread position:
               154-365
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               132, 34
               

               Conread position:
               155-268
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               155-361
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 83
               

               Conread position:
               155-362
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               156-364
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 115
               

               Conread position:
               156-364
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               156-364
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 164
               

               Conread position:
               156-365
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               157-356
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 114
               

               Conread position:
               157-358
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 84
               

               Conread position:
               157-363
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 114
               

               Conread position:
               157-365
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               159-365
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               161-359
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               24, 142
               

               Conread position:
               161-365
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               162-363
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               162-365
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 122
               

               Conread position:
               163-362
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 107
               

               Conread position:
               164-363
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               166-346
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               166-367
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               167-367
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               170-362
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               170-364
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 53
               

               Conread position:
               170-365
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               170-365
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               16, 185
               

               Conread position:
               171-337
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               171-363
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               175-363
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               175-365
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               175-366
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 97
               

               Conread position:
               181-368
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               6, 89
               

               Conread position:
               184-363
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 88
               

               Conread position:
               185-365
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 84
               

               Conread position:
               186-366
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               187-374
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               189-364
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               189-365
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               189-366
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               189-366
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               97, 82
               

               Conread position:
               190-365
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 81
               

               Conread position:
               194-366
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               203-362
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 112
               

               Conread position:
               203-364
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               18, 65
               

               Conread position:
               203-365
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               17, 54
               

               Conread position:
               215-365
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               215-365
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               230-365
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               234-368
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               235-362
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               235-363
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 35
               
Show alignments to all cow chromosomes.