Cow genome map

Conread name: Thy1-THY010122C11

Conread position: 100-364
Cow position: chr7:58773971-58773710 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 19

Conread position: 139-364
Cow position: chr7:53743864-53744096 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 47, 61

Conread position: 143-364
Cow position: chr7:20437-20209 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 24

Conread position: 146-340
Cow position: chr7:48648595-48648793 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 40, 125

Conread position: 146-367
Cow position: chr7:40213382-40213156 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 9

Conread position: 147-361
Cow position: chr7:64949134-64948928 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 147-363
Cow position: chr7:45709175-45709400 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 125

Conread position: 147-366
Cow position: chr7:42460464-42460241 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 30

Conread position: 148-276
Cow position: chr7:46327739-46327867 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 121

Conread position: 148-304
Cow position: chr7:47172682-47172833 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 86

Conread position: 148-361
Cow position: chr7:41328015-41328228 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 18

Conread position: 148-363
Cow position: chr7:62102621-62102400 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 91

Conread position: 148-364
Cow position: chr7:26501439-26501651 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 50

Conread position: 148-364
Cow position: chr7:26665528-26665751 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 75

Conread position: 148-364
Cow position: chr7:37364817-37364604 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 135, 38

Conread position: 148-365
Cow position: chr7:2744519-2744723 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 123

Conread position: 148-365
Cow position: chr7:13985295-13985508 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 13

Conread position: 148-365
Cow position: chr7:17406321-17406545 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 118

Conread position: 148-365
Cow position: chr7:21197355-21197573 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 82

Conread position: 148-365
Cow position: chr7:26195778-26195980 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 12

Conread position: 148-365
Cow position: chr7:40758209-40758440 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 148-365
Cow position: chr7:56098633-56098420 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 57

Conread position: 148-366
Cow position: chr7:48443741-48443949 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 19

Conread position: 148-368
Cow position: chr7:23131624-23131400 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 80

Conread position: 148-381
Cow position: chr7:25445420-25445190 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 37, 13

Conread position: 148-381
Cow position: chr7:40916610-40916376 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 13

Conread position: 148-385
Cow position: chr7:51666423-51666651 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 13

Conread position: 149-364
Cow position: chr7:51321762-51321529 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 67

Conread position: 149-364
Cow position: chr7:59713496-59713271 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 122

Conread position: 149-365
Cow position: chr7:43215533-43215318 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 36, 86

Conread position: 149-366
Cow position: chr7:36746353-36746126 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 79

Conread position: 150-262
Cow position: chr7:47771596-47771482 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 150-364
Cow position: chr7:34199351-34199132 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 181
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 20

Conread position: 150-365
Cow position: chr7:20081037-20081257 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 90

Conread position: 150-365
Cow position: chr7:20794239-20794459 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 122

Conread position: 150-365
Cow position: chr7:59843734-59843949 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 17

Conread position: 150-365
Cow position: chr7:68088653-68088431 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 95

Conread position: 150-366
Cow position: chr7:51248844-51249068 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 35, 122

Conread position: 150-368
Cow position: chr7:50108257-50108479 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 61

Conread position: 151-362
Cow position: chr7:24767209-24767415 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 10

Conread position: 151-363
Cow position: chr7:55076677-55076891 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 23

Conread position: 151-364
Cow position: chr7:28090254-28090047 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 16

Conread position: 151-364
Cow position: chr7:41445383-41445168 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 25

Conread position: 152-364
Cow position: chr7:11869816-11870023 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 85

Conread position: 152-365
Cow position: chr7:23177558-23177341 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 33, 119

Conread position: 152-365
Cow position: chr7:26466768-26466557 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 37

Conread position: 153-361
Cow position: chr7:25703206-25703411 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 33, 13

Conread position: 153-365
Cow position: chr7:12212581-12212800 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 83

Conread position: 153-365
Cow position: chr7:19881024-19881225 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 117

Conread position: 153-367
Cow position: chr7:51708359-51708583 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 32, 120

Conread position: 156-365
Cow position: chr7:52718616-52718828 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 81

Conread position: 157-364
Cow position: chr7:20147319-20147525 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 116

Conread position: 157-364
Cow position: chr7:45955944-45955733 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 28, 77

Conread position: 157-365
Cow position: chr7:3322819-3322604 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 6, 117

Conread position: 158-338
Cow position: chr7:58490091-58489912 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 110

Conread position: 158-364
Cow position: chr7:40067676-40067465 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 89

Conread position: 158-365
Cow position: chr7:10942834-10943049 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 158-365
Cow position: chr7:40571287-40571074 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 18

Conread position: 158-365
Cow position: chr7:48547846-48548054 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 21

Conread position: 159-365
Cow position: chr7:36129018-36128803 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 112

Conread position: 159-366
Cow position: chr7:12201909-12202111 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 10

Conread position: 160-353
Cow position: chr7:37817833-37818029 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 52

Conread position: 160-364
Cow position: chr7:64135449-64135657 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 66

Conread position: 162-362
Cow position: chr7:17757049-17756848 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 7

Conread position: 163-335
Cow position: chr7:8261012-8261188 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 22

Conread position: 164-363
Cow position: chr7:31881687-31881496 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 62

Conread position: 166-350
Cow position: chr7:33276042-33275856 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 105

Conread position: 167-364
Cow position: chr7:68753680-68753881 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 104

Conread position: 167-366
Cow position: chr7:10345417-10345627 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 107

Conread position: 170-364
Cow position: chr7:25083697-25083499 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 53

Conread position: 170-365
Cow position: chr7:9075058-9074866 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 170-365
Cow position: chr7:63085563-63085368 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 41

Conread position: 171-362
Cow position: chr7:65618237-65618437 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 5, 105

Conread position: 171-365
Cow position: chr7:18858346-18858147 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 14

Conread position: 172-310
Cow position: chr7:64104741-64104600 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 88

Conread position: 175-364
Cow position: chr7:39930291-39930105 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 62

Conread position: 177-362
Cow position: chr7:19616704-19616889 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 95

Conread position: 179-364
Cow position: chr7:28324633-28324442 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 34

Conread position: 182-365
Cow position: chr7:57610746-57610562 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 104, 39

Conread position: 185-364
Cow position: chr7:64140142-64140318 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 185-364
Cow position: chr7:68868097-68867915 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 84

Conread position: 189-367
Cow position: chr7:27136485-27136302 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 45

Conread position: 190-365
Cow position: chr7:22793332-22793153 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 40

Conread position: 190-390
Cow position: chr7:47874988-47875189 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 50

Conread position: 191-382
Cow position: chr7:45927176-45927366 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 35

Conread position: 198-365
Cow position: chr7:48899866-48900033 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 72

Conread position: 201-364
Cow position: chr7:11872622-11872791 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 68

Conread position: 211-363
Cow position: chr7:43132111-43131957 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 216-381
Cow position: chr7:48289321-48289156 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 53

Conread position: 221-364
Cow position: chr7:49395605-49395751 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 65, 48

Conread position: 229-367
Cow position: chr7:39602495-39602633 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 69

Conread position: 235-364
Cow position: chr7:25867568-25867698 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 33

Conread position: 235-369
Cow position: chr7:14029272-14029138 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 34

Conread position: 238-367
Cow position: chr7:24061623-24061496 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.