Cow genome map
| Conread name: | Thy1-THY010122C11 |
| Conread position: | 137-364 |
| Cow position: | chr8:12538605-12538822 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 48, 134 |
| Conread position: | 143-351 |
| Cow position: | chr8:31690806-31690590 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 42, 128 |
| Conread position: | 145-310 |
| Cow position: | chr8:29935912-29935750 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 145-361 |
| Cow position: | chr8:16487309-16487528 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 145-363 |
| Cow position: | chr8:16031576-16031793 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 146-361 |
| Cow position: | chr8:36505374-36505144 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 133 |
| Conread position: | 146-364 |
| Cow position: | chr8:51905047-51905269 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 147-365 |
| Cow position: | chr8:29028081-29028307 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 31, 127 |
| Conread position: | 148-254 |
| Cow position: | chr8:942807-942699 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 148-268 |
| Cow position: | chr8:31815051-31815172 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 148-284 |
| Cow position: | chr8:27053604-27053739 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 148-296 |
| Cow position: | chr8:58334541-58334391 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 148-310 |
| Cow position: | chr8:59507085-59507248 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 148-311 |
| Cow position: | chr8:13738494-13738325 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-349 |
| Cow position: | chr8:28221570-28221776 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-357 |
| Cow position: | chr8:45486594-45486392 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 138, 38 |
| Conread position: | 148-362 |
| Cow position: | chr8:13975887-13975673 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 148-362 |
| Cow position: | chr8:39985744-39985959 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 148-363 |
| Cow position: | chr8:34287919-34287703 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 148-364 |
| Cow position: | chr8:6431480-6431263 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 148-364 |
| Cow position: | chr8:55829354-55829562 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 121, 37 |
| Conread position: | 148-365 |
| Cow position: | chr8:30135914-30135691 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-365 |
| Cow position: | chr8:31313889-31313667 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 148-365 |
| Cow position: | chr8:50953558-50953340 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 118 |
| Conread position: | 148-365 |
| Cow position: | chr8:53558613-53558828 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 122 |
| Conread position: | 148-365 |
| Cow position: | chr8:55305074-55304850 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 148-366 |
| Cow position: | chr8:44664581-44664809 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 148-388 |
| Cow position: | chr8:52195914-52195671 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 149-358 |
| Cow position: | chr8:11638122-11637901 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 149-362 |
| Cow position: | chr8:42139053-42139267 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 150-329 |
| Cow position: | chr8:40549620-40549796 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 147, 119 |
| Conread position: | 150-365 |
| Cow position: | chr8:24934146-24933927 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 150-365 |
| Cow position: | chr8:47483927-47484144 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 122 |
| Conread position: | 150-366 |
| Cow position: | chr8:43904777-43904555 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 55 |
| Conread position: | 150-367 |
| Cow position: | chr8:25871719-25871497 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 150-384 |
| Cow position: | chr8:42889152-42889378 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 136, 35 |
| Conread position: | 151-361 |
| Cow position: | chr8:41264298-41264085 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 151-363 |
| Cow position: | chr8:3433869-3433652 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 151-364 |
| Cow position: | chr8:29765249-29765031 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 151-364 |
| Cow position: | chr8:53587473-53587692 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 151-365 |
| Cow position: | chr8:49687228-49687449 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 152-365 |
| Cow position: | chr8:31253801-31253586 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 153-363 |
| Cow position: | chr8:60320507-60320300 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 153-365 |
| Cow position: | chr8:3704611-3704397 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 153-365 |
| Cow position: | chr8:8134512-8134733 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 153-365 |
| Cow position: | chr8:20683959-20683747 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 153-366 |
| Cow position: | chr8:44704077-44703863 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 153-367 |
| Cow position: | chr8:21382706-21382922 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 154-363 |
| Cow position: | chr8:56248971-56248743 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 154-364 |
| Cow position: | chr8:1023954-1023735 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 154-365 |
| Cow position: | chr8:1834911-1834696 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 154-365 |
| Cow position: | chr8:22103191-22103407 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 154-381 |
| Cow position: | chr8:4940321-4940551 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 155-361 |
| Cow position: | chr8:1327419-1327213 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 156-365 |
| Cow position: | chr8:4161039-4161252 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 157-362 |
| Cow position: | chr8:32491538-32491333 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 157-365 |
| Cow position: | chr8:39936497-39936277 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 158-298 |
| Cow position: | chr8:60170628-60170486 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 158-364 |
| Cow position: | chr8:49265321-49265533 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 158-365 |
| Cow position: | chr8:47295966-47295751 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 159-364 |
| Cow position: | chr8:31317530-31317315 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 160-367 |
| Cow position: | chr8:8901987-8902196 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 162-362 |
| Cow position: | chr8:35436633-35436837 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 163-364 |
| Cow position: | chr8:32079714-32079910 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 166-367 |
| Cow position: | chr8:24546502-24546305 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 167-362 |
| Cow position: | chr8:48763532-48763338 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 167-396 |
| Cow position: | chr8:18220752-18220984 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 170-363 |
| Cow position: | chr8:54031847-54031654 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 170-366 |
| Cow position: | chr8:42575670-42575468 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 170-367 |
| Cow position: | chr8:36465180-36464978 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 171-359 |
| Cow position: | chr8:21282039-21281854 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 171-381 |
| Cow position: | chr8:3147570-3147780 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 172-339 |
| Cow position: | chr8:20131801-20131625 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 182-364 |
| Cow position: | chr8:35966070-35966258 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 53 |
| Conread position: | 182-365 |
| Cow position: | chr8:52863770-52863586 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 190-354 |
| Cow position: | chr8:24909555-24909399 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 190-367 |
| Cow position: | chr8:53214375-53214551 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 192-365 |
| Cow position: | chr8:9962617-9962798 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 199-363 |
| Cow position: | chr8:28884776-28884603 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 215-365 |
| Cow position: | chr8:2749354-2749202 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 215-365 |
| Cow position: | chr8:37007987-37008138 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 216-362 |
| Cow position: | chr8:34113338-34113192 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 237-374 |
| Cow position: | chr8:20892258-20892127 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 247-365 |
| Cow position: | chr8:33432151-33432033 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 22 |
Show alignments to all cow chromosomes.