Cow genome map

Conread name: Tra1-TCH01A040030

Conread position: 223-718
Cow position:
Alignm length: 499
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 64

Conread position: 228-460
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 40

Conread position: 267-710
Cow position:
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 134

Conread position: 267-720
Cow position:
Alignm length: 464
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 20

Conread position: 267-787
Cow position:
Alignm length: 529
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 268-457
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 21

Conread position: 268-461
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 32, 18

Conread position: 268-461
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 268-703
Cow position:
Alignm length: 439
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-706
Cow position:
Alignm length: 446
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 268-709
Cow position:
Alignm length: 443
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 19

Conread position: 268-709
Cow position:
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 268-709
Cow position:
Alignm length: 454
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 268-710
Cow position:
Alignm length: 449
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 268-710
Cow position:
Alignm length: 448
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-714
Cow position:
Alignm length: 459
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 268-728
Cow position:
Alignm length: 467
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 268-774
Cow position:
Alignm length: 519
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 268-786
Cow position:
Alignm length: 549
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-787
Cow position:
Alignm length: 531
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 269-710
Cow position:
Alignm length: 451
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 272-702
Cow position:
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 273-588
Cow position:
Alignm length: 328
Alignm identity: 236
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 33, 13

Conread position: 273-723
Cow position:
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 274-440
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 274-687
Cow position:
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 15

Conread position: 275-710
Cow position:
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 12

Conread position: 276-784
Cow position:
Alignm length: 519
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 281-710
Cow position:
Alignm length: 437
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 216

Conread position: 287-444
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 79, 51

Conread position: 298-706
Cow position:
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 67

Conread position: 298-786
Cow position:
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 20

Conread position: 299-710
Cow position:
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 74

Conread position: 300-787
Cow position:
Alignm length: 502
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 53

Conread position: 308-787
Cow position:
Alignm length: 494
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 15

Conread position: 318-719
Cow position:
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 145

Conread position: 324-710
Cow position:
Alignm length: 400
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 69

Conread position: 327-706
Cow position:
Alignm length: 382
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 41

Conread position: 331-786
Cow position:
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 45

Conread position: 339-724
Cow position:
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 124

Conread position: 345-768
Cow position:
Alignm length: 439
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 118

Conread position: 347-789
Cow position:
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 22

Conread position: 355-787
Cow position:
Alignm length: 462
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 49

Conread position: 372-710
Cow position:
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 21

Conread position: 372-786
Cow position:
Alignm length: 440
Alignm identity: 299
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 81, 208

Conread position: 390-702
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 149, 40

Conread position: 394-729
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 77

Conread position: 394-787
Cow position:
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 48

Conread position: 409-787
Cow position:
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 53

Conread position: 423-785
Cow position:
Alignm length: 376
Alignm identity: 263
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 115, 37

Conread position: 426-706
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 37

Conread position: 429-710
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 111, 34

Conread position: 490-787
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 83

Conread position: 493-785
Cow position:
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 498-710
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 41, 21

Conread position: 499-704
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 26, 81

Conread position: 499-706
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 104

Conread position: 499-708
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 499-710
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 499-721
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 73

Conread position: 499-729
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 146

Conread position: 499-762
Cow position:
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 26

Conread position: 499-787
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 499-787
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 499-787
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 178, 26

Conread position: 499-787
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 97

Conread position: 499-791
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 500-709
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 91

Conread position: 500-787
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 211, 23

Conread position: 501-710
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 501-719
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 62

Conread position: 501-776
Cow position:
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 505-719
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 68

Conread position: 507-709
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 168

Conread position: 508-675
Cow position:
Alignm length: 169
Alignm identity: 136
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 11

Conread position: 508-706
Cow position:
Alignm length: 202
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 11

Conread position: 508-709
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 87

Conread position: 508-787
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 509-785
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 177

Conread position: 513-710
Cow position:
Alignm length: 203
Alignm identity: 163
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 6

Conread position: 515-696
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 515-713
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 81

Conread position: 516-728
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 85

Conread position: 516-772
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 517-696
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 10

Conread position: 517-709
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 85

Conread position: 518-709
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 84

Conread position: 518-787
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 519-719
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 520-736
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 19, 97

Conread position: 524-714
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 525-787
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 14, 55

Conread position: 527-787
Cow position:
Alignm length: 269
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 529-715
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 178

Conread position: 531-705
Cow position:
Alignm length: 175
Alignm identity: 137
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 138, 0

Conread position: 537-719
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 537-719
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 134

Conread position: 537-787
Cow position:
Alignm length: 265
Alignm identity: 199
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 168, 56

Conread position: 537-788
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 137, 58

Conread position: 543-787
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 42

Conread position: 545-719
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 129, 43

Conread position: 546-728
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 547-709
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 548-739
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 118, 5

Conread position: 549-709
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 125, 12

Conread position: 550-787
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 162, 127

Conread position: 563-712
Cow position:
Alignm length: 152
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 89

Conread position: 572-722
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 582-709
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 65, 96

Conread position: 591-702
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 597-710
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 617-710
Cow position:
Alignm length: 95
Alignm identity: 82
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 73

Conread position: 624-779
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 624-787
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.