Cow genome map


           Conread name:
           Tra1-TCH01A040030
        

               Conread position:
               253-786
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               267-385
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               267-461
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               267-787
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               268-456
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               268-461
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               268-695
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               268-699
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 80
               

               Conread position:
               268-699
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               289
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               268-703
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               268-704
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               268-709
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 22
               

               Conread position:
               268-710
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 17
               

               Conread position:
               268-711
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               268-719
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 19
               

               Conread position:
               268-783
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               268-786
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 221
               

               Conread position:
               268-790
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               269-605
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               269-679
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               269-697
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               269-787
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               270-787
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 171
               

               Conread position:
               271-781
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               272-620
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               272-706
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               272-707
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               272-707
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               272-710
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               276-785
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               279-786
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               287-744
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               288-710
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 176
               

               Conread position:
               303-780
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               322-784
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               385, 84
               

               Conread position:
               323-710
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 65
               

               Conread position:
               348-710
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 20
               

               Conread position:
               349-719
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 79
               

               Conread position:
               352-710
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 83
               

               Conread position:
               352-710
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 107
               

               Conread position:
               354-789
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 14
               

               Conread position:
               360-719
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 28
               

               Conread position:
               381-787
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 82
               

               Conread position:
               382-668
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               157, 83
               

               Conread position:
               385-722
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 86
               

               Conread position:
               385-781
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               406-676
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 58
               

               Conread position:
               412-787
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               127, 7
               

               Conread position:
               414-718
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               419-706
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               255, 44
               

               Conread position:
               490-714
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               49, 178
               

               Conread position:
               492-710
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               499-709
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               499-709
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               152, 20
               

               Conread position:
               499-709
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               499-710
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               499-710
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               499-785
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               40, 112
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               500-709
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               500-710
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               501-710
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               508-787
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               508-787
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 90
               

               Conread position:
               510-787
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               513-702
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               516-787
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               517-687
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               518-689
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               519-789
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               523-787
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               151, 10
               

               Conread position:
               526-728
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               527-706
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               529-787
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               537-709
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               141, 50
               

               Conread position:
               542-710
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               543-786
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               170, 45
               

               Conread position:
               546-787
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 100
               

               Conread position:
               549-711
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               554-710
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               571-787
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               103, 121
               

               Conread position:
               580-715
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               7, 94
               

               Conread position:
               582-710
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               584-706
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               587-710
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               599-787
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               74, 97
               

               Conread position:
               601-787
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               73, 0
               
Show alignments to all cow chromosomes.