Cow genome map

Conread name: Tra1-TCH01A040030

Conread position: 252-430
Cow position: chr20:10885406-10885230 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 252-719
Cow position: chr20:13877160-13876697 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 254-461
Cow position: chr20:3294210-3294006 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 34

Conread position: 266-785
Cow position: chr20:39742877-39743399 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 267-762
Cow position: chr20:22446075-22445581 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 268-461
Cow position: chr20:19155360-19155153 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 20

Conread position: 268-632
Cow position: chr20:4668505-4668872 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 18

Conread position: 268-689
Cow position: chr20:4788671-4788251 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-703
Cow position: chr20:18185137-18185557 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 268-706
Cow position: chr20:28439640-28440080 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 193

Conread position: 268-709
Cow position: chr20:9267564-9267111 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 20

Conread position: 268-729
Cow position: chr20:19352204-19351735 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 18

Conread position: 268-740
Cow position: chr20:9433175-9433613 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-786
Cow position: chr20:8577811-8578339 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-786
Cow position: chr20:14806450-14806977 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-787
Cow position: chr20:12442133-12441606 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 268-787
Cow position: chr20:32846916-32847436 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-791
Cow position: chr20:398726-398211 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 268-791
Cow position: chr20:13269190-13269717 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 272-683
Cow position: chr20:22313589-22313188 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 272-710
Cow position: chr20:19363794-19363368 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 272-786
Cow position: chr20:23792169-23792694 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 273-787
Cow position: chr20:10235420-10235922 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 14

Conread position: 276-703
Cow position: chr20:3781861-3781436 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 317-737
Cow position: chr20:18321183-18320766 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 147

Conread position: 319-785
Cow position: chr20:5702362-5702813 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 144

Conread position: 325-710
Cow position: chr20:28982321-28982696 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 139

Conread position: 374-787
Cow position: chr20:31740543-31740128 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 61, 67

Conread position: 382-787
Cow position: chr20:19328080-19328479 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 11

Conread position: 393-787
Cow position: chr20:39398168-39398572 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 134

Conread position: 403-787
Cow position: chr20:13751944-13752316 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 60

Conread position: 406-696
Cow position: chr20:25009939-25009656 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 133, 57

Conread position: 411-698
Cow position: chr20:15761241-15760962 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 80, 51

Conread position: 460-787
Cow position: chr20:38768713-38768372 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 29, 145

Conread position: 493-674
Cow position: chr20:22029720-22029903 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 499-701
Cow position: chr20:13465306-13465498 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 99

Conread position: 499-704
Cow position: chr20:35364840-35365036 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 18

Conread position: 499-709
Cow position: chr20:20471578-20471778 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 49

Conread position: 499-719
Cow position: chr20:18551151-18551369 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 60

Conread position: 499-728
Cow position: chr20:3331506-3331272 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 499-729
Cow position: chr20:28296078-28296308 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 40, 86

Conread position: 499-786
Cow position: chr20:14735465-14735759 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 499-787
Cow position: chr20:12420833-12420527 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 104

Conread position: 500-787
Cow position: chr20:23505618-23505919 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 501-786
Cow position: chr20:22235104-22235397 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 89

Conread position: 508-785
Cow position: chr20:382330-382043 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 156

Conread position: 509-710
Cow position: chr20:5826735-5826938 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 513-719
Cow position: chr20:15593098-15593301 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 83

Conread position: 517-709
Cow position: chr20:9923403-9923579 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 59

Conread position: 518-787
Cow position: chr20:20967147-20967412 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 52

Conread position: 519-776
Cow position: chr20:12239872-12239600 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 533-781
Cow position: chr20:2204842-2204600 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 175, 73

Conread position: 540-787
Cow position: chr20:3254878-3255127 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 113

Conread position: 542-709
Cow position: chr20:7439017-7438857 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 132, 25

Conread position: 546-791
Cow position: chr20:13652521-13652272 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 39

Conread position: 554-787
Cow position: chr20:10789022-10788799 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 159, 34

Conread position: 561-710
Cow position: chr20:8307864-8308016 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 561-786
Cow position: chr20:28441177-28441417 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 106

Conread position: 572-787
Cow position: chr20:35407719-35407942 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 190

Conread position: 576-785
Cow position: chr20:2298911-2298697 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 102, 19

Conread position: 585-750
Cow position: chr20:3069208-3069047 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 89, 111

Conread position: 591-786
Cow position: chr20:8546941-8547158 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 602-729
Cow position: chr20:39267071-39266940 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 617-787
Cow position: chr20:7738323-7738140 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 626-787
Cow position: chr20:26077745-26077577 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.