Cow genome map

Conread name: Tra1-TCH01A040030

Conread position: 219-786
Cow position:
Alignm length: 579
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 27

Conread position: 252-716
Cow position:
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 254-706
Cow position:
Alignm length: 457
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 14

Conread position: 263-710
Cow position:
Alignm length: 451
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 263-786
Cow position:
Alignm length: 547
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 267-710
Cow position:
Alignm length: 448
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 267-719
Cow position:
Alignm length: 458
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 267-787
Cow position:
Alignm length: 540
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 268-431
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 18

Conread position: 268-457
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 17

Conread position: 268-460
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 11

Conread position: 268-675
Cow position:
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 25

Conread position: 268-702
Cow position:
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 20

Conread position: 268-704
Cow position:
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-706
Cow position:
Alignm length: 440
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 19

Conread position: 268-718
Cow position:
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 196

Conread position: 268-722
Cow position:
Alignm length: 458
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 55

Conread position: 268-728
Cow position:
Alignm length: 466
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-762
Cow position:
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-762
Cow position:
Alignm length: 507
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 268-783
Cow position:
Alignm length: 537
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 268-785
Cow position:
Alignm length: 542
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 268-786
Cow position:
Alignm length: 544
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 268-787
Cow position:
Alignm length: 537
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 271-720
Cow position:
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 16

Conread position: 272-687
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 272-775
Cow position:
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 272-787
Cow position:
Alignm length: 546
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 272-787
Cow position:
Alignm length: 530
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 184

Conread position: 272-787
Cow position:
Alignm length: 540
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 274-719
Cow position:
Alignm length: 450
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 16

Conread position: 274-787
Cow position:
Alignm length: 526
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 274-787
Cow position:
Alignm length: 520
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 275-787
Cow position:
Alignm length: 533
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 12

Conread position: 276-709
Cow position:
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 276-787
Cow position:
Alignm length: 528
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 278-710
Cow position:
Alignm length: 436
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 61

Conread position: 279-787
Cow position:
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 72

Conread position: 281-467
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 287-709
Cow position:
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 179

Conread position: 287-787
Cow position:
Alignm length: 523
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 293-728
Cow position:
Alignm length: 445
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 127

Conread position: 298-710
Cow position:
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 164

Conread position: 298-786
Cow position:
Alignm length: 496
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 83

Conread position: 301-787
Cow position:
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 46

Conread position: 305-709
Cow position:
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 33

Conread position: 306-718
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 150

Conread position: 335-787
Cow position:
Alignm length: 460
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 115

Conread position: 345-786
Cow position:
Alignm length: 450
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 118

Conread position: 354-710
Cow position:
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 109

Conread position: 356-788
Cow position:
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 19

Conread position: 359-775
Cow position:
Alignm length: 436
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 79

Conread position: 366-723
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 88

Conread position: 374-741
Cow position:
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 89

Conread position: 380-787
Cow position:
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 29

Conread position: 381-710
Cow position:
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 145

Conread position: 386-787
Cow position:
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 77

Conread position: 397-715
Cow position:
Alignm length: 326
Alignm identity: 225
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 34

Conread position: 412-787
Cow position:
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 415-709
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 123, 48

Conread position: 419-724
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 119, 44

Conread position: 419-785
Cow position:
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 44

Conread position: 421-785
Cow position:
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 42

Conread position: 422-735
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 41

Conread position: 423-786
Cow position:
Alignm length: 371
Alignm identity: 257
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 116, 40

Conread position: 478-719
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 41

Conread position: 482-787
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 37

Conread position: 499-703
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 104

Conread position: 499-703
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 105

Conread position: 499-706
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 499-710
Cow position:
Alignm length: 214
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 70

Conread position: 499-710
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 20

Conread position: 499-710
Cow position:
Alignm length: 217
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 499-710
Cow position:
Alignm length: 214
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 20

Conread position: 499-710
Cow position:
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 499-710
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 175, 96

Conread position: 499-710
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 74

Conread position: 499-710
Cow position:
Alignm length: 218
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 26

Conread position: 499-718
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 192

Conread position: 499-787
Cow position:
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 499-787
Cow position:
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 500-710
Cow position:
Alignm length: 215
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 24

Conread position: 500-787
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 19

Conread position: 501-706
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 101

Conread position: 501-722
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 31

Conread position: 501-787
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 211, 86

Conread position: 502-785
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 111

Conread position: 508-776
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 44

Conread position: 508-784
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 81

Conread position: 508-787
Cow position:
Alignm length: 287
Alignm identity: 209
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 166, 28

Conread position: 508-787
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 12, 99

Conread position: 509-710
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 87

Conread position: 509-776
Cow position:
Alignm length: 274
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 48

Conread position: 509-787
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 89

Conread position: 512-705
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 513-696
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 93

Conread position: 514-706
Cow position:
Alignm length: 195
Alignm identity: 154
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 514-787
Cow position:
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 515-787
Cow position:
Alignm length: 291
Alignm identity: 215
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 24, 55

Conread position: 516-740
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 70

Conread position: 518-710
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 80

Conread position: 519-718
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 57

Conread position: 519-781
Cow position:
Alignm length: 284
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 57

Conread position: 525-706
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 62

Conread position: 525-718
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 526-717
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 149, 36

Conread position: 527-787
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 147, 20

Conread position: 533-787
Cow position:
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 538-717
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 546-787
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 128, 50

Conread position: 554-787
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 80

Conread position: 554-787
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 120, 31

Conread position: 572-787
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 5

Conread position: 582-788
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 170

Conread position: 588-704
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 20

Conread position: 591-786
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 25

Show alignments to all cow chromosomes.