Cow genome map


           Conread name:
           Tra1-TCH01A040030
        

               Conread position:
               266-787
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               267-709
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               384, 16
               

               Conread position:
               267-710
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               268-457
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               268-715
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               268-715
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               268-785
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               269-710
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               269-719
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               273-787
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               274-593
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               82, 209
               

               Conread position:
               285-787
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 168
               

               Conread position:
               287-706
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 101
               

               Conread position:
               298-786
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 233
               

               Conread position:
               341-710
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 122
               

               Conread position:
               346-710
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 117
               

               Conread position:
               348-781
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 115
               

               Conread position:
               348-785
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               365, 45
               

               Conread position:
               349-705
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               354-785
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 18
               

               Conread position:
               356-787
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 110
               

               Conread position:
               357-719
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 106
               

               Conread position:
               374-759
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               161, 89
               

               Conread position:
               393-728
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 42
               

               Conread position:
               401-718
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 52
               

               Conread position:
               404-699
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               135, 48
               

               Conread position:
               412-787
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 62
               

               Conread position:
               413-723
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               490-719
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               493-783
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 99
               

               Conread position:
               496-785
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               498-709
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 98
               

               Conread position:
               499-697
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               499-709
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               499-710
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               40, 89
               

               Conread position:
               499-710
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 63
               

               Conread position:
               499-710
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               499-718
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               499-719
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               499-776
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               499-785
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 128
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               499-788
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               502-709
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               508-717
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               508-786
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               513-782
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               513-785
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 167
               

               Conread position:
               516-727
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 52
               

               Conread position:
               528-710
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               539-787
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               135, 58
               

               Conread position:
               541-719
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               553-735
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               554-707
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               555-785
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 158
               

               Conread position:
               562-710
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               570-785
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               142, 46
               

               Conread position:
               582-787
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               604-706
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               605-710
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               619-787
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 48
               
Show alignments to all cow chromosomes.