Cow genome map
| Conread name: | Tra1-TCH01A040030 |
| Conread position: | 245-400 |
| Cow position: | chr26:32603490-32603336 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 268-435 |
| Cow position: | chr26:5430032-5429865 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 268-461 |
| Cow position: | chr26:7150919-7150727 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 268-696 |
| Cow position: | chr26:18918540-18918119 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 268-701 |
| Cow position: | chr26:9063875-9064303 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 29 |
| Conread position: | 268-719 |
| Cow position: | chr26:30806975-30806524 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 268-787 |
| Cow position: | chr26:9867589-9867061 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 21 |
| Conread position: | 272-727 |
| Cow position: | chr26:21912328-21912787 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 298-706 |
| Cow position: | chr26:798734-798331 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 157 |
| Conread position: | 303-783 |
| Cow position: | chr26:33202469-33202009 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 71 |
| Conread position: | 311-709 |
| Cow position: | chr26:7961216-7961602 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 322-723 |
| Cow position: | chr26:9491531-9491909 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 111 |
| Conread position: | 324-787 |
| Cow position: | chr26:8700458-8699982 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 344-710 |
| Cow position: | chr26:32956007-32955661 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 119 |
| Conread position: | 360-709 |
| Cow position: | chr26:29353884-29353536 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 385-728 |
| Cow position: | chr26:5103168-5102834 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 387-787 |
| Cow position: | chr26:20292026-20291627 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 77 |
| Conread position: | 388-710 |
| Cow position: | chr26:33475328-33475641 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 412-788 |
| Cow position: | chr26:13021469-13021079 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 48 |
| Conread position: | 422-709 |
| Cow position: | chr26:19459367-19459655 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 117, 6 |
| Conread position: | 484-787 |
| Cow position: | chr26:30034656-30034353 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 499-675 |
| Cow position: | chr26:24280591-24280763 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 499-709 |
| Cow position: | chr26:7103275-7103061 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 499-709 |
| Cow position: | chr26:19769323-19769114 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 40, 167 |
| Conread position: | 499-710 |
| Cow position: | chr26:13801873-13802084 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 140 |
| Conread position: | 499-787 |
| Cow position: | chr26:4363067-4363365 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 499-787 |
| Cow position: | chr26:8810894-8811192 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 501-710 |
| Cow position: | chr26:32898107-32897900 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 501-718 |
| Cow position: | chr26:13706233-13706024 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 508-710 |
| Cow position: | chr26:27491732-27491530 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 508-719 |
| Cow position: | chr26:20129904-20129692 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 509-728 |
| Cow position: | chr26:28760314-28760102 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 203, 46 |
| Conread position: | 518-679 |
| Cow position: | chr26:15200736-15200579 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 519-709 |
| Cow position: | chr26:8746051-8745862 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 152 |
| Conread position: | 519-720 |
| Cow position: | chr26:2345861-2345667 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 519-787 |
| Cow position: | chr26:31605189-31605471 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 527-719 |
| Cow position: | chr26:30128229-30128042 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 532-710 |
| Cow position: | chr26:5306927-5307112 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 543-787 |
| Cow position: | chr26:22892633-22892380 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 548-709 |
| Cow position: | chr26:6252659-6252822 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 550-787 |
| Cow position: | chr26:14175095-14175347 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 127, 26 |
| Conread position: | 558-722 |
| Cow position: | chr26:23315588-23315754 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 141 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 585-706 |
| Cow position: | chr26:28250992-28251117 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 591-710 |
| Cow position: | chr26:12964845-12964725 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 597-709 |
| Cow position: | chr26:19445984-19446095 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.