Cow genome map

Conread name: Tra1-TCH01A040030

Conread position: 245-400
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 25

Conread position: 268-435
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 17

Conread position: 268-461
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 29, 20

Conread position: 268-696
Cow position:
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 21

Conread position: 268-701
Cow position:
Alignm length: 441
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 29

Conread position: 268-719
Cow position:
Alignm length: 459
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-787
Cow position:
Alignm length: 540
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 21

Conread position: 272-727
Cow position:
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 298-706
Cow position:
Alignm length: 418
Alignm identity: 279
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 157

Conread position: 303-783
Cow position:
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 71

Conread position: 311-709
Cow position:
Alignm length: 403
Alignm identity: 266
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 44

Conread position: 322-723
Cow position:
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 111

Conread position: 324-787
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 140

Conread position: 344-710
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 119

Conread position: 360-709
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 8, 104

Conread position: 385-728
Cow position:
Alignm length: 347
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 154, 75

Conread position: 387-787
Cow position:
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 77

Conread position: 388-710
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 77

Conread position: 412-788
Cow position:
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 48

Conread position: 422-709
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 117, 6

Conread position: 484-787
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 8

Conread position: 499-675
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 97

Conread position: 499-709
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 499-709
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 167

Conread position: 499-710
Cow position:
Alignm length: 213
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 140

Conread position: 499-787
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 20

Conread position: 499-787
Cow position:
Alignm length: 305
Alignm identity: 222
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 40, 107

Conread position: 501-710
Cow position:
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 95

Conread position: 501-718
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 18

Conread position: 508-710
Cow position:
Alignm length: 205
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 20

Conread position: 508-719
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 509-728
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 203, 46

Conread position: 518-679
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 67

Conread position: 519-709
Cow position:
Alignm length: 195
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 152

Conread position: 519-720
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 68

Conread position: 519-787
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 23, 66

Conread position: 527-719
Cow position:
Alignm length: 194
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 76

Conread position: 532-710
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 543-787
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 28

Conread position: 548-709
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 550-787
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 127, 26

Conread position: 558-722
Cow position:
Alignm length: 167
Alignm identity: 141
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 117, 0

Conread position: 585-706
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 26

Conread position: 591-710
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 597-709
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.