Cow genome map


           Conread name:
           Tra1-TCH01A040030
        

               Conread position:
               251-706
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               252-709
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               311
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               259-710
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 9
               

               Conread position:
               267-706
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               311
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               268-423
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               268-453
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               268-461
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               268-461
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               268-646
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               268-709
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               268-709
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               268-715
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               268-717
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               268-719
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               268-776
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 19
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 19
               

               Conread position:
               272-442
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               272-709
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               402, 21
               

               Conread position:
               272-728
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               272-787
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               289-706
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               293-705
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 178
               

               Conread position:
               298-709
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 165
               

               Conread position:
               315-776
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 96
               

               Conread position:
               357-717
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 106
               

               Conread position:
               360-703
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               287, 66
               

               Conread position:
               363-709
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 100
               

               Conread position:
               369-787
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 26
               

               Conread position:
               375-717
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 26
               

               Conread position:
               403-706
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               160, 60
               

               Conread position:
               464-704
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 97
               

               Conread position:
               482-787
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               56, 193
               

               Conread position:
               494-715
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 124
               

               Conread position:
               499-706
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 83
               

               Conread position:
               499-711
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               499-711
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 17
               

               Conread position:
               499-718
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               499-722
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               499-727
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               499-729
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 166
               

               Conread position:
               499-781
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               499-785
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               40, 89
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 196
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               500-709
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               500-787
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               500-787
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               501-711
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               176, 45
               

               Conread position:
               508-710
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               508-722
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               508-727
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 137
               

               Conread position:
               516-709
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               516-737
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               519-679
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               522-773
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               533-709
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               141, 11
               

               Conread position:
               546-787
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               115, 91
               

               Conread position:
               547-785
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               126, 9
               

               Conread position:
               548-786
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               126, 117
               

               Conread position:
               568-710
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               569-710
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               592-787
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               607-787
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               611-740
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               619-710
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               55, 0
               
Show alignments to all cow chromosomes.