Cow genome map

Conread name: Tra1-TCH01A040030

Conread position: 250-740
Cow position:
Alignm length: 499
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 16

Conread position: 252-710
Cow position:
Alignm length: 462
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 14

Conread position: 252-719
Cow position:
Alignm length: 470
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 13

Conread position: 254-786
Cow position:
Alignm length: 562
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 14

Conread position: 267-705
Cow position:
Alignm length: 460
Alignm identity: 308
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 20

Conread position: 267-709
Cow position:
Alignm length: 446
Alignm identity: 297
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 20

Conread position: 268-433
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 20

Conread position: 268-457
Cow position:
Alignm length: 198
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 20

Conread position: 268-461
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 29, 17

Conread position: 268-474
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 268-662
Cow position:
Alignm length: 400
Alignm identity: 277
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 20

Conread position: 268-679
Cow position:
Alignm length: 416
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-683
Cow position:
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 268-698
Cow position:
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 47

Conread position: 268-707
Cow position:
Alignm length: 445
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 268-710
Cow position:
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 19

Conread position: 268-728
Cow position:
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 19

Conread position: 268-728
Cow position:
Alignm length: 466
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 268-787
Cow position:
Alignm length: 532
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 19

Conread position: 268-787
Cow position:
Alignm length: 546
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-787
Cow position:
Alignm length: 556
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 268-787
Cow position:
Alignm length: 532
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 19

Conread position: 268-787
Cow position:
Alignm length: 544
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 11

Conread position: 268-787
Cow position:
Alignm length: 544
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 269-709
Cow position:
Alignm length: 464
Alignm identity: 304
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 18

Conread position: 272-736
Cow position:
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 15

Conread position: 272-736
Cow position:
Alignm length: 468
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 15

Conread position: 272-786
Cow position:
Alignm length: 518
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 272-787
Cow position:
Alignm length: 544
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 280-710
Cow position:
Alignm length: 433
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 287-787
Cow position:
Alignm length: 518
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 62

Conread position: 295-709
Cow position:
Alignm length: 439
Alignm identity: 296
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 11, 341

Conread position: 298-709
Cow position:
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 174

Conread position: 322-719
Cow position:
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 327-722
Cow position:
Alignm length: 413
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 273

Conread position: 327-778
Cow position:
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 28

Conread position: 349-786
Cow position:
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 114

Conread position: 350-787
Cow position:
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 18

Conread position: 357-716
Cow position:
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 106

Conread position: 374-709
Cow position:
Alignm length: 354
Alignm identity: 240
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 14

Conread position: 375-729
Cow position:
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 89

Conread position: 379-706
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 85

Conread position: 379-719
Cow position:
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 80

Conread position: 387-736
Cow position:
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 76

Conread position: 390-719
Cow position:
Alignm length: 333
Alignm identity: 238
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 133, 83

Conread position: 391-706
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 74

Conread position: 392-787
Cow position:
Alignm length: 416
Alignm identity: 278
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 86, 198

Conread position: 396-714
Cow position:
Alignm length: 322
Alignm identity: 212
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 142, 67

Conread position: 401-787
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 8

Conread position: 404-709
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 61

Conread position: 407-729
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 132, 23

Conread position: 415-785
Cow position:
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 45

Conread position: 418-706
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 45

Conread position: 418-710
Cow position:
Alignm length: 305
Alignm identity: 216
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 121, 45

Conread position: 419-737
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 120, 43

Conread position: 429-787
Cow position:
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 34

Conread position: 490-787
Cow position:
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 499-703
Cow position:
Alignm length: 206
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 499-706
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 19

Conread position: 499-709
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 20

Conread position: 499-709
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 170

Conread position: 499-710
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 177

Conread position: 499-710
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 20

Conread position: 499-710
Cow position:
Alignm length: 216
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 499-710
Cow position:
Alignm length: 218
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 20

Conread position: 499-717
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 499-718
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 91

Conread position: 499-728
Cow position:
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 197

Conread position: 499-785
Cow position:
Alignm length: 303
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 499-785
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 178

Conread position: 499-786
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 103

Conread position: 499-787
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 40, 29

Conread position: 499-787
Cow position:
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 93

Conread position: 499-787
Cow position:
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 499-787
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 60

Conread position: 500-706
Cow position:
Alignm length: 209
Alignm identity: 165
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 135

Conread position: 500-787
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 19

Conread position: 500-787
Cow position:
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 501-709
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 173, 7

Conread position: 501-709
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 146, 35

Conread position: 501-718
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 113

Conread position: 508-709
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 97

Conread position: 508-710
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 31, 9

Conread position: 508-787
Cow position:
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 93

Conread position: 510-787
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 10, 72

Conread position: 514-705
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 136

Conread position: 515-709
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 92

Conread position: 515-786
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 163

Conread position: 515-787
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 70

Conread position: 519-710
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 33

Conread position: 519-717
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 67

Conread position: 525-706
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 90

Conread position: 529-710
Cow position:
Alignm length: 184
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 535-730
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 109, 137

Conread position: 537-703
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 45

Conread position: 541-716
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 61

Conread position: 542-787
Cow position:
Alignm length: 258
Alignm identity: 195
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 44, 81

Conread position: 548-776
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 165, 13

Conread position: 554-776
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 119, 45

Conread position: 555-670
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 562-787
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 130

Conread position: 570-717
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 575-709
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 577-787
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 580-787
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 94, 25

Conread position: 588-787
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 72

Conread position: 590-709
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 84, 30

Conread position: 601-710
Cow position:
Alignm length: 111
Alignm identity: 95
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 601-719
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 602-786
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 72, 66

Conread position: 618-719
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.