Cow genome map
| Conread name: | Tra1-TCH01A040030 |
| Conread position: | 250-740 |
| Cow position: | chr3:30179564-30180044 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 252-710 |
| Cow position: | chr3:23169587-23169136 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 252-719 |
| Cow position: | chr3:58951110-58951555 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 13 |
| Conread position: | 254-786 |
| Cow position: | chr3:80564441-80564989 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 267-705 |
| Cow position: | chr3:70913597-70913151 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 267-709 |
| Cow position: | chr3:33633380-33632962 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 268-433 |
| Cow position: | chr3:49741448-49741282 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 268-457 |
| Cow position: | chr3:39172014-39171818 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 268-461 |
| Cow position: | chr3:66118706-66118513 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 268-474 |
| Cow position: | chr3:37040937-37041143 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-662 |
| Cow position: | chr3:54766619-54766996 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 268-679 |
| Cow position: | chr3:77496314-77496721 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 268-683 |
| Cow position: | chr3:8557284-8556881 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 268-698 |
| Cow position: | chr3:62624137-62623730 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 268-707 |
| Cow position: | chr3:16620089-16619652 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 268-710 |
| Cow position: | chr3:15058106-15057678 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 19 |
| Conread position: | 268-728 |
| Cow position: | chr3:55272535-55272097 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 268-728 |
| Cow position: | chr3:58336972-58337423 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 268-787 |
| Cow position: | chr3:2630298-2630798 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 19 |
| Conread position: | 268-787 |
| Cow position: | chr3:6689493-6690024 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 268-787 |
| Cow position: | chr3:45647153-45647704 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 268-787 |
| Cow position: | chr3:69751204-69750686 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 268-787 |
| Cow position: | chr3:73708552-73709071 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 268-787 |
| Cow position: | chr3:80054041-80053518 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 269-709 |
| Cow position: | chr3:82473537-82473988 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 272-736 |
| Cow position: | chr3:14466202-14465756 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 15 |
| Conread position: | 272-736 |
| Cow position: | chr3:29887917-29887466 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 15 |
| Conread position: | 272-786 |
| Cow position: | chr3:19711814-19711315 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 272-787 |
| Cow position: | chr3:26219559-26219027 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 280-710 |
| Cow position: | chr3:49327456-49327872 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 287-787 |
| Cow position: | chr3:45881423-45881922 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 295-709 |
| Cow position: | chr3:51255284-51255718 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 11, 341 |
| Conread position: | 298-709 |
| Cow position: | chr3:1831038-1830645 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 174 |
| Conread position: | 322-719 |
| Cow position: | chr3:53588848-53588445 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 148 |
| Conread position: | 327-722 |
| Cow position: | chr3:56059343-56059750 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 273 |
| Conread position: | 327-778 |
| Cow position: | chr3:79292386-79292844 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 28 |
| Conread position: | 349-786 |
| Cow position: | chr3:5851349-5850906 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 114 |
| Conread position: | 350-787 |
| Cow position: | chr3:7338196-7337758 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 18 |
| Conread position: | 357-716 |
| Cow position: | chr3:21341377-21341025 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 106 |
| Conread position: | 374-709 |
| Cow position: | chr3:62292536-62292193 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 375-729 |
| Cow position: | chr3:13899850-13899496 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 89 |
| Conread position: | 379-706 |
| Cow position: | chr3:42584139-42584467 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 379-719 |
| Cow position: | chr3:31500963-31501290 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 80 |
| Conread position: | 387-736 |
| Cow position: | chr3:53593083-53592737 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 76 |
| Conread position: | 390-719 |
| Cow position: | chr3:54782392-54782077 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 133, 83 |
| Conread position: | 391-706 |
| Cow position: | chr3:13352980-13353288 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 148, 74 |
| Conread position: | 392-787 |
| Cow position: | chr3:28908582-28908179 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 198 |
| Conread position: | 396-714 |
| Cow position: | chr3:56697564-56697879 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 401-787 |
| Cow position: | chr3:74532951-74533373 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 404-709 |
| Cow position: | chr3:58286264-58285969 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 407-729 |
| Cow position: | chr3:55190109-55189806 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 415-785 |
| Cow position: | chr3:53149970-53150353 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 45 |
| Conread position: | 418-706 |
| Cow position: | chr3:15081092-15080819 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 121, 45 |
| Conread position: | 418-710 |
| Cow position: | chr3:12323715-12324005 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 121, 45 |
| Conread position: | 419-737 |
| Cow position: | chr3:53573102-53572796 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 120, 43 |
| Conread position: | 429-787 |
| Cow position: | chr3:80071775-80072153 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 34 |
| Conread position: | 490-787 |
| Cow position: | chr3:74233914-74234210 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 499-703 |
| Cow position: | chr3:45534577-45534373 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 499-706 |
| Cow position: | chr3:42480346-42480543 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 499-709 |
| Cow position: | chr3:59205963-59206175 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 499-709 |
| Cow position: | chr3:83920920-83921127 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 170 |
| Conread position: | 499-710 |
| Cow position: | chr3:19789397-19789184 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 499-710 |
| Cow position: | chr3:26682071-26681873 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 499-710 |
| Cow position: | chr3:39970150-39969935 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 499-710 |
| Cow position: | chr3:53790822-53790606 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 499-717 |
| Cow position: | chr3:364497-364274 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 499-718 |
| Cow position: | chr3:62883924-62884144 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 499-728 |
| Cow position: | chr3:2397061-2396830 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 197 |
| Conread position: | 499-785 |
| Cow position: | chr3:70895768-70896070 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 499-785 |
| Cow position: | chr3:78076911-78077207 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 178 |
| Conread position: | 499-786 |
| Cow position: | chr3:15158763-15159054 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 499-787 |
| Cow position: | chr3:23417142-23416865 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 499-787 |
| Cow position: | chr3:32584880-32585174 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 499-787 |
| Cow position: | chr3:68881387-68881097 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 499-787 |
| Cow position: | chr3:78946117-78945818 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 500-706 |
| Cow position: | chr3:83816070-83815863 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 39, 135 |
| Conread position: | 500-787 |
| Cow position: | chr3:23408619-23408334 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 500-787 |
| Cow position: | chr3:68708278-68707989 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 501-709 |
| Cow position: | chr3:8457381-8457584 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 173, 7 |
| Conread position: | 501-709 |
| Cow position: | chr3:73764469-73764265 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 146, 35 |
| Conread position: | 501-718 |
| Cow position: | chr3:51227879-51228109 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 508-709 |
| Cow position: | chr3:74611293-74611494 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 97 |
| Conread position: | 508-710 |
| Cow position: | chr3:83474480-83474672 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 508-787 |
| Cow position: | chr3:70899631-70899915 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 510-787 |
| Cow position: | chr3:22716548-22716274 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 514-705 |
| Cow position: | chr3:56637403-56637594 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 515-709 |
| Cow position: | chr3:30009173-30008984 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 92 |
| Conread position: | 515-786 |
| Cow position: | chr3:75080504-75080786 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 515-787 |
| Cow position: | chr3:58969158-58968879 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 519-710 |
| Cow position: | chr3:18557926-18558102 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 519-717 |
| Cow position: | chr3:23448389-23448201 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 525-706 |
| Cow position: | chr3:18217017-18216844 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 132, 90 |
| Conread position: | 529-710 |
| Cow position: | chr3:44932260-44932443 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 535-730 |
| Cow position: | chr3:71135547-71135744 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 109, 137 |
| Conread position: | 537-703 |
| Cow position: | chr3:22232882-22232728 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 45 |
| Conread position: | 541-716 |
| Cow position: | chr3:188624-188800 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 61 |
| Conread position: | 542-787 |
| Cow position: | chr3:68156496-68156746 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 548-776 |
| Cow position: | chr3:56523659-56523429 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 165, 13 |
| Conread position: | 554-776 |
| Cow position: | chr3:60265458-60265238 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 555-670 |
| Cow position: | chr3:45221921-45221811 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 562-787 |
| Cow position: | chr3:20842074-20841849 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 130 |
| Conread position: | 570-717 |
| Cow position: | chr3:27697189-27697039 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 575-709 |
| Cow position: | chr3:14598745-14598880 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 577-787 |
| Cow position: | chr3:38828563-38828783 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 580-787 |
| Cow position: | chr3:30940620-30940831 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 588-787 |
| Cow position: | chr3:57273874-57274083 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 72 |
| Conread position: | 590-709 |
| Cow position: | chr3:59596995-59597113 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 30 |
| Conread position: | 601-710 |
| Cow position: | chr3:76922842-76922732 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 601-719 |
| Cow position: | chr3:70762302-70762183 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 602-786 |
| Cow position: | chr3:36418644-36418461 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 618-719 |
| Cow position: | chr3:68616487-68616387 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.