Cow genome map

Conread name: Tra1-TCH01A040030

Conread position: 249-786
Cow position:
Alignm length: 555
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 17

Conread position: 253-696
Cow position:
Alignm length: 447
Alignm identity: 307
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 51, 13

Conread position: 254-645
Cow position:
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 15

Conread position: 254-709
Cow position:
Alignm length: 469
Alignm identity: 305
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 40

Conread position: 267-620
Cow position:
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 126

Conread position: 267-786
Cow position:
Alignm length: 532
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 268-461
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 18

Conread position: 268-461
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 29, 20

Conread position: 268-461
Cow position:
Alignm length: 195
Alignm identity: 156
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 77, 19

Conread position: 268-684
Cow position:
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 268-706
Cow position:
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 268-706
Cow position:
Alignm length: 443
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 268-709
Cow position:
Alignm length: 459
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 19

Conread position: 268-710
Cow position:
Alignm length: 445
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-710
Cow position:
Alignm length: 445
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-717
Cow position:
Alignm length: 453
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 268-718
Cow position:
Alignm length: 462
Alignm identity: 308
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 19

Conread position: 268-727
Cow position:
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 268-728
Cow position:
Alignm length: 465
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 268-776
Cow position:
Alignm length: 523
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-776
Cow position:
Alignm length: 527
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 20

Conread position: 268-785
Cow position:
Alignm length: 540
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 268-787
Cow position:
Alignm length: 542
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 19

Conread position: 268-787
Cow position:
Alignm length: 535
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 268-789
Cow position:
Alignm length: 538
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 269-709
Cow position:
Alignm length: 446
Alignm identity: 295
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 197

Conread position: 272-710
Cow position:
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 272-719
Cow position:
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 272-776
Cow position:
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 273-785
Cow position:
Alignm length: 517
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 291-787
Cow position:
Alignm length: 519
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 113

Conread position: 312-718
Cow position:
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 151

Conread position: 315-719
Cow position:
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 146

Conread position: 318-727
Cow position:
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 145

Conread position: 318-787
Cow position:
Alignm length: 496
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 23

Conread position: 319-702
Cow position:
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 73

Conread position: 322-776
Cow position:
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 143

Conread position: 342-709
Cow position:
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 344-787
Cow position:
Alignm length: 480
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 290

Conread position: 347-787
Cow position:
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 79

Conread position: 350-769
Cow position:
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 17

Conread position: 361-706
Cow position:
Alignm length: 352
Alignm identity: 251
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 163, 102

Conread position: 374-668
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 76

Conread position: 374-786
Cow position:
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 89

Conread position: 376-710
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 16

Conread position: 377-781
Cow position:
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 16

Conread position: 378-787
Cow position:
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 74

Conread position: 380-787
Cow position:
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 83

Conread position: 393-698
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 145, 70

Conread position: 406-728
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 57

Conread position: 412-787
Cow position:
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 26

Conread position: 412-787
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 127, 51

Conread position: 419-786
Cow position:
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 44

Conread position: 431-709
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 215, 31

Conread position: 464-785
Cow position:
Alignm length: 346
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 174

Conread position: 469-710
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 498-709
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 178

Conread position: 498-718
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 88

Conread position: 498-740
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 21

Conread position: 499-681
Cow position:
Alignm length: 185
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 499-683
Cow position:
Alignm length: 187
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 136

Conread position: 499-704
Cow position:
Alignm length: 207
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 37

Conread position: 499-708
Cow position:
Alignm length: 212
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 499-709
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 97

Conread position: 499-709
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 20

Conread position: 499-709
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 39, 83

Conread position: 499-710
Cow position:
Alignm length: 214
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 82

Conread position: 499-710
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 39, 99

Conread position: 499-710
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 499-719
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 499-776
Cow position:
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 499-787
Cow position:
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 113

Conread position: 499-787
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 175, 45

Conread position: 499-787
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 499-787
Cow position:
Alignm length: 312
Alignm identity: 235
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 26, 53

Conread position: 499-791
Cow position:
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 25

Conread position: 500-698
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 104

Conread position: 500-709
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 19

Conread position: 500-787
Cow position:
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 183

Conread position: 501-710
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 18

Conread position: 501-737
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 116

Conread position: 502-710
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 104

Conread position: 503-703
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 86

Conread position: 503-718
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 36, 16

Conread position: 508-703
Cow position:
Alignm length: 197
Alignm identity: 160
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 160

Conread position: 508-710
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 17

Conread position: 508-710
Cow position:
Alignm length: 205
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 56

Conread position: 508-719
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 102

Conread position: 508-787
Cow position:
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 509-717
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 88

Conread position: 510-787
Cow position:
Alignm length: 291
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 89

Conread position: 514-787
Cow position:
Alignm length: 293
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 62

Conread position: 517-786
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 519-709
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 93

Conread position: 520-710
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 12

Conread position: 524-786
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 102

Conread position: 526-706
Cow position:
Alignm length: 184
Alignm identity: 153
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 536-723
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 109, 59

Conread position: 538-710
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 16, 77

Conread position: 543-710
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 131, 63

Conread position: 553-710
Cow position:
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 0

Conread position: 554-677
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 555-710
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 28

Conread position: 557-702
Cow position:
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 24

Conread position: 558-787
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 561-787
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 145, 53

Conread position: 562-709
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 27

Conread position: 563-791
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 111, 24

Conread position: 572-787
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 102, 25

Conread position: 578-710
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 580-710
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 582-786
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 590-776
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 82

Conread position: 628-787
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 86

Show alignments to all cow chromosomes.