Cow genome map
| Conread name: | Tra1-TCH01A040030 |
| Conread position: | 252-706 |
| Cow position: | chr5:55942865-55942420 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 252-727 |
| Cow position: | chr5:28247709-28248170 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 252-786 |
| Cow position: | chr5:18702670-18702147 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 267-706 |
| Cow position: | chr5:31285427-31285863 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 268-453 |
| Cow position: | chr5:65053240-65053430 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 268-461 |
| Cow position: | chr5:1246786-1246980 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 268-461 |
| Cow position: | chr5:5812538-5812345 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 268-657 |
| Cow position: | chr5:17384554-17384167 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 270, 19 |
| Conread position: | 268-662 |
| Cow position: | chr5:17387049-17386657 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 268-674 |
| Cow position: | chr5:41980948-41981340 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 268-703 |
| Cow position: | chr5:75756164-75756618 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 303 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 268-706 |
| Cow position: | chr5:34115188-34115626 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 268-709 |
| Cow position: | chr5:31480699-31481125 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 268-709 |
| Cow position: | chr5:65593419-65593853 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 196 |
| Conread position: | 268-710 |
| Cow position: | chr5:21828402-21828846 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 268-715 |
| Cow position: | chr5:3696514-3696953 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 268-716 |
| Cow position: | chr5:5937870-5938312 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 268-719 |
| Cow position: | chr5:30302444-30302882 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 268-722 |
| Cow position: | chr5:66257194-66257631 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 268-781 |
| Cow position: | chr5:31470028-31469525 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 268-786 |
| Cow position: | chr5:30816260-30816778 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 206 |
| Conread position: | 268-787 |
| Cow position: | chr5:4166218-4166715 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 268-787 |
| Cow position: | chr5:30276248-30276764 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 268-787 |
| Cow position: | chr5:34638439-34638958 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 268-787 |
| Cow position: | chr5:56467251-56467765 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 268-789 |
| Cow position: | chr5:15598687-15598159 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 269-746 |
| Cow position: | chr5:51293190-51292702 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 327 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 270-722 |
| Cow position: | chr5:34506378-34505937 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 193 |
| Conread position: | 272-719 |
| Cow position: | chr5:19470627-19470200 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 272-786 |
| Cow position: | chr5:20408108-20407605 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 272-790 |
| Cow position: | chr5:41546341-41545819 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 273-709 |
| Cow position: | chr5:27615045-27615494 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 273-787 |
| Cow position: | chr5:47601362-47601886 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 276-787 |
| Cow position: | chr5:3582131-3582634 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 277-785 |
| Cow position: | chr5:57935552-57935036 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 278-719 |
| Cow position: | chr5:14314079-14314514 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 279-719 |
| Cow position: | chr5:21617022-21617446 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 279-789 |
| Cow position: | chr5:41951523-41951020 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 287-710 |
| Cow position: | chr5:62827190-62826774 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 287-786 |
| Cow position: | chr5:46510304-46509792 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 161 |
| Conread position: | 287-791 |
| Cow position: | chr5:69337378-69337898 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 158 |
| Conread position: | 288-710 |
| Cow position: | chr5:6087000-6086578 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 179 |
| Conread position: | 289-709 |
| Cow position: | chr5:360376-359963 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 293-709 |
| Cow position: | chr5:10261673-10261259 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 172 |
| Conread position: | 298-703 |
| Cow position: | chr5:12672449-12672057 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 168 |
| Conread position: | 299-709 |
| Cow position: | chr5:41604183-41604604 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 291 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 71, 168 |
| Conread position: | 302-735 |
| Cow position: | chr5:56523754-56524175 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 161 |
| Conread position: | 306-709 |
| Cow position: | chr5:65887430-65887027 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 77, 116 |
| Conread position: | 309-787 |
| Cow position: | chr5:62171994-62172486 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 5 |
| Conread position: | 358-722 |
| Cow position: | chr5:20974810-20974452 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 181, 94 |
| Conread position: | 360-706 |
| Cow position: | chr5:66338724-66339055 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 105 |
| Conread position: | 360-781 |
| Cow position: | chr5:41129392-41129810 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 103, 233 |
| Conread position: | 361-706 |
| Cow position: | chr5:2395236-2395577 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 174, 102 |
| Conread position: | 363-710 |
| Cow position: | chr5:9894483-9894146 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 88 |
| Conread position: | 364-710 |
| Cow position: | chr5:34288826-34288491 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 367-787 |
| Cow position: | chr5:67212026-67212435 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 96 |
| Conread position: | 374-709 |
| Cow position: | chr5:35209820-35209497 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 274, 99 |
| Conread position: | 392-715 |
| Cow position: | chr5:66119586-66119264 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 148, 68 |
| Conread position: | 407-710 |
| Cow position: | chr5:5111392-5111095 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 56 |
| Conread position: | 408-706 |
| Cow position: | chr5:65941566-65941276 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 36 |
| Conread position: | 494-786 |
| Cow position: | chr5:19278927-19278633 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 499-706 |
| Cow position: | chr5:9859947-9859738 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 499-706 |
| Cow position: | chr5:24996453-24996247 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 39 |
| Conread position: | 499-706 |
| Cow position: | chr5:33467270-33467066 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 108 |
| Conread position: | 499-709 |
| Cow position: | chr5:65924928-65924712 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 499-710 |
| Cow position: | chr5:43929963-43929758 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 99 |
| Conread position: | 499-710 |
| Cow position: | chr5:56433572-56433784 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 499-718 |
| Cow position: | chr5:50533613-50533399 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 499-728 |
| Cow position: | chr5:28926414-28926183 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 499-734 |
| Cow position: | chr5:17063323-17063085 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 499-781 |
| Cow position: | chr5:13536928-13537207 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 499-786 |
| Cow position: | chr5:57626580-57626863 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 499-787 |
| Cow position: | chr5:6683577-6683293 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 499-787 |
| Cow position: | chr5:40889513-40889223 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 499-787 |
| Cow position: | chr5:55967112-55966806 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 499-787 |
| Cow position: | chr5:64139334-64139634 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 500-709 |
| Cow position: | chr5:37714133-37713918 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 151 |
| Conread position: | 500-719 |
| Cow position: | chr5:48144019-48143795 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 181 |
| Conread position: | 501-709 |
| Cow position: | chr5:40759752-40759955 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 501-710 |
| Cow position: | chr5:16894003-16893793 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 38, 164 |
| Conread position: | 501-710 |
| Cow position: | chr5:35684707-35684916 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 173 |
| Conread position: | 501-764 |
| Cow position: | chr5:39695429-39695683 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 173, 17 |
| Conread position: | 508-710 |
| Cow position: | chr5:22243005-22242796 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 124, 184 |
| Conread position: | 508-762 |
| Cow position: | chr5:4797531-4797274 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 508-781 |
| Cow position: | chr5:15722274-15722006 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 508-785 |
| Cow position: | chr5:56028750-56028469 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 508-786 |
| Cow position: | chr5:12352002-12351734 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 509-709 |
| Cow position: | chr5:72172804-72173005 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 512-787 |
| Cow position: | chr5:33537674-33537942 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 513-710 |
| Cow position: | chr5:60126158-60126351 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 27, 76 |
| Conread position: | 514-709 |
| Cow position: | chr5:62142456-62142653 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 515-710 |
| Cow position: | chr5:5848400-5848209 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 515-737 |
| Cow position: | chr5:6504093-6503875 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 517-709 |
| Cow position: | chr5:11427453-11427256 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 519-786 |
| Cow position: | chr5:57736905-57737172 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 521-709 |
| Cow position: | chr5:68481016-68481217 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 521-737 |
| Cow position: | chr5:44049495-44049708 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 521-785 |
| Cow position: | chr5:7044918-7044633 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 524-675 |
| Cow position: | chr5:24837150-24837002 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 525-710 |
| Cow position: | chr5:23169022-23168849 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 527-787 |
| Cow position: | chr5:44447089-44446791 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 528-782 |
| Cow position: | chr5:56518410-56518153 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 530-787 |
| Cow position: | chr5:50943352-50943083 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 537-709 |
| Cow position: | chr5:22643408-22643246 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 58 |
| Conread position: | 537-710 |
| Cow position: | chr5:69461144-69461310 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 136, 51 |
| Conread position: | 537-717 |
| Cow position: | chr5:74610882-74610705 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 129, 74 |
| Conread position: | 538-787 |
| Cow position: | chr5:48010036-48009785 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 136, 49 |
| Conread position: | 543-786 |
| Cow position: | chr5:46512951-46512695 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 543-789 |
| Cow position: | chr5:6670382-6670117 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 550-787 |
| Cow position: | chr5:6286604-6286359 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 554-736 |
| Cow position: | chr5:43816784-43816603 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 558-785 |
| Cow position: | chr5:41010166-41009932 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 149, 115 |
| Conread position: | 567-687 |
| Cow position: | chr5:46426011-46425894 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 107, 28 |
| Conread position: | 583-711 |
| Cow position: | chr5:63865647-63865776 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 588-776 |
| Cow position: | chr5:70952019-70951817 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 590-787 |
| Cow position: | chr5:64027149-64026945 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 591-787 |
| Cow position: | chr5:7755702-7755495 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 599-710 |
| Cow position: | chr5:38647227-38647338 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 601-787 |
| Cow position: | chr5:44726456-44726260 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 609-728 |
| Cow position: | chr5:55849865-55849745 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 619-786 |
| Cow position: | chr5:7697893-7698073 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 626-789 |
| Cow position: | chr5:62378686-62378856 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 157 |
| Conread position: | 651-785 |
| Cow position: | chr5:69636155-69636296 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.