Cow genome map

Conread name: Tra1-TCH01A040030

Conread position: 252-729
Cow position:
Alignm length: 491
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 252-787
Cow position:
Alignm length: 544
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 254-709
Cow position:
Alignm length: 459
Alignm identity: 303
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 12

Conread position: 264-718
Cow position:
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 26

Conread position: 267-649
Cow position:
Alignm length: 396
Alignm identity: 267
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 19

Conread position: 267-711
Cow position:
Alignm length: 449
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 267-716
Cow position:
Alignm length: 457
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 267-719
Cow position:
Alignm length: 482
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 267-787
Cow position:
Alignm length: 528
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 267-787
Cow position:
Alignm length: 545
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 268-395
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 18

Conread position: 268-589
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 31, 19

Conread position: 268-605
Cow position:
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 17

Conread position: 268-703
Cow position:
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 8

Conread position: 268-706
Cow position:
Alignm length: 443
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 268-706
Cow position:
Alignm length: 443
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 196

Conread position: 268-706
Cow position:
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 11

Conread position: 268-709
Cow position:
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 268-709
Cow position:
Alignm length: 452
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-709
Cow position:
Alignm length: 445
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 268-710
Cow position:
Alignm length: 444
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 19

Conread position: 268-718
Cow position:
Alignm length: 460
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-729
Cow position:
Alignm length: 467
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-730
Cow position:
Alignm length: 474
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 268-786
Cow position:
Alignm length: 537
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 268-787
Cow position:
Alignm length: 523
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 268-787
Cow position:
Alignm length: 532
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 268-787
Cow position:
Alignm length: 523
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-787
Cow position:
Alignm length: 532
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 19

Conread position: 268-787
Cow position:
Alignm length: 539
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 268-790
Cow position:
Alignm length: 535
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 269-709
Cow position:
Alignm length: 457
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 17

Conread position: 269-710
Cow position:
Alignm length: 448
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 269-718
Cow position:
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 20

Conread position: 272-675
Cow position:
Alignm length: 418
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 15

Conread position: 272-702
Cow position:
Alignm length: 442
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 272-760
Cow position:
Alignm length: 497
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 287-716
Cow position:
Alignm length: 437
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 231

Conread position: 293-702
Cow position:
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 74

Conread position: 294-710
Cow position:
Alignm length: 419
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 153

Conread position: 298-781
Cow position:
Alignm length: 493
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 14

Conread position: 299-788
Cow position:
Alignm length: 506
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 145

Conread position: 322-786
Cow position:
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 143

Conread position: 324-709
Cow position:
Alignm length: 388
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 139

Conread position: 327-709
Cow position:
Alignm length: 411
Alignm identity: 270
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 299

Conread position: 327-785
Cow position:
Alignm length: 467
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 131

Conread position: 327-786
Cow position:
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 30

Conread position: 334-710
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 91

Conread position: 336-786
Cow position:
Alignm length: 468
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 347-787
Cow position:
Alignm length: 455
Alignm identity: 304
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 192, 70

Conread position: 354-710
Cow position:
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 108

Conread position: 354-720
Cow position:
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 110

Conread position: 360-718
Cow position:
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 32

Conread position: 360-729
Cow position:
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 103

Conread position: 382-740
Cow position:
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 80

Conread position: 386-718
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 153, 76

Conread position: 388-789
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 74

Conread position: 415-710
Cow position:
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 48

Conread position: 415-710
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 47

Conread position: 418-710
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 42

Conread position: 482-710
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 37

Conread position: 488-709
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 31

Conread position: 499-696
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 499-703
Cow position:
Alignm length: 207
Alignm identity: 163
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 107

Conread position: 499-709
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 68

Conread position: 499-710
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 34, 83

Conread position: 499-710
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 20

Conread position: 499-710
Cow position:
Alignm length: 214
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 185

Conread position: 499-710
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 499-710
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 20

Conread position: 499-719
Cow position:
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 20

Conread position: 499-719
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 118

Conread position: 499-728
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 40, 95

Conread position: 499-775
Cow position:
Alignm length: 289
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 25

Conread position: 499-780
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 146

Conread position: 499-781
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 499-781
Cow position:
Alignm length: 292
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 33

Conread position: 499-785
Cow position:
Alignm length: 301
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 69

Conread position: 499-786
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 154, 138

Conread position: 499-787
Cow position:
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 499-787
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 182, 20

Conread position: 499-788
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 190

Conread position: 499-791
Cow position:
Alignm length: 303
Alignm identity: 190
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 39, 25

Conread position: 499-791
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 175, 20

Conread position: 500-705
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 56

Conread position: 500-729
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 160

Conread position: 500-787
Cow position:
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 81

Conread position: 501-709
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 36

Conread position: 501-786
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 104

Conread position: 501-787
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 60

Conread position: 507-787
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 89

Conread position: 508-709
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 145

Conread position: 508-710
Cow position:
Alignm length: 204
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 166

Conread position: 508-719
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 88

Conread position: 508-786
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 35

Conread position: 508-787
Cow position:
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 509-711
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 200

Conread position: 514-737
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 0

Conread position: 515-710
Cow position:
Alignm length: 198
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 52

Conread position: 515-786
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 59

Conread position: 515-787
Cow position:
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 73

Conread position: 518-787
Cow position:
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 518-791
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 240

Conread position: 519-786
Cow position:
Alignm length: 280
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 521-787
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 522-709
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 17, 85

Conread position: 524-705
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 15, 0

Conread position: 533-719
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 81

Conread position: 537-702
Cow position:
Alignm length: 167
Alignm identity: 135
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 137, 85

Conread position: 542-710
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 132, 60

Conread position: 547-710
Cow position:
Alignm length: 165
Alignm identity: 135
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 127, 0

Conread position: 548-787
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 164, 49

Conread position: 549-710
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 563-728
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 565-786
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 112, 36

Conread position: 569-787
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 61

Conread position: 575-722
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 581-787
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 591-710
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 593-706
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 595-787
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 8

Conread position: 597-789
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 0

Conread position: 602-787
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 605-706
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.