Cow genome map


           Conread name:
           Tra1-TCH01A040030
        

               Conread position:
               252-709
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               318
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               252-789
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               262-787
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               358
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               267-460
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               267-461
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               267-787
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               268-395
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               268-460
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               268-642
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               268-702
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               268-705
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               268-706
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               268-706
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               268-706
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               268-709
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               268-709
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 21
               

               Conread position:
               268-710
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               268-718
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               268-776
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 195
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               268-787
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               270-706
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               305
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               272-679
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               272-700
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               272-710
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               272-737
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               272-762
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 191
               

               Conread position:
               272-787
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               272-787
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               274-709
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 13
               

               Conread position:
               274-787
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               280-776
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               283-787
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 21
               

               Conread position:
               287-717
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 54
               

               Conread position:
               287-787
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 177
               

               Conread position:
               293-719
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               295-787
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 182
               

               Conread position:
               295-787
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 171
               

               Conread position:
               298-687
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 154
               

               Conread position:
               317-710
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 156
               

               Conread position:
               331-710
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 114
               

               Conread position:
               343-706
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 94
               

               Conread position:
               355-719
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 84
               

               Conread position:
               358-702
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 104
               

               Conread position:
               367-714
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 25
               

               Conread position:
               379-710
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 94
               

               Conread position:
               386-787
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 76
               

               Conread position:
               389-706
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               6, 74
               

               Conread position:
               403-709
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               416-710
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 45
               

               Conread position:
               433-728
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               469-709
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               490-789
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               492-709
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               496-731
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               499-696
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               40, 112
               

               Conread position:
               499-706
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               499-709
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               141, 20
               

               Conread position:
               499-709
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               499-718
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 204
               

               Conread position:
               499-719
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               499-719
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               40, 99
               

               Conread position:
               499-782
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 25
               

               Conread position:
               499-785
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 114
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 38
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               40, 104
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               499-787
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               500-709
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               500-709
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               500-710
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               500-719
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               501-737
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               501-764
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               173, 18
               

               Conread position:
               502-716
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               506-787
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               507-710
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 89
               

               Conread position:
               508-709
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               74, 34
               

               Conread position:
               508-787
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               512-710
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 122
               

               Conread position:
               517-709
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 97
               

               Conread position:
               518-706
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               519-719
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               520-709
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               156
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               520-709
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               537-728
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               34, 111
               

               Conread position:
               537-787
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               540-706
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               134, 55
               

               Conread position:
               548-787
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               126, 21
               

               Conread position:
               552-787
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               554-708
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               152, 61
               

               Conread position:
               555-787
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               119, 63
               

               Conread position:
               561-791
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 18
               

               Conread position:
               574-706
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               581-710
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               588-788
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               589-710
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               591-710
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               595-710
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               597-787
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               616-787
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               629-779
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 0
               
Show alignments to all cow chromosomes.