Cow genome map

Conread name: Tra1-TCH01A060005

Conread position: 1-147
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 55, 46

Conread position: 1-149
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 1-163
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 49

Conread position: 1-175
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 1-183
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 1-183
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 60, 46

Conread position: 1-187
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 1-207
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 1-210
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 58

Conread position: 1-214
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 1-220
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 1-229
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 48

Conread position: 1-239
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 44

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-248
Cow position:
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 197

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 69, 46

Conread position: 1-262
Cow position:
Alignm length: 264
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 48

Conread position: 1-263
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 53, 45

Conread position: 1-263
Cow position:
Alignm length: 274
Alignm identity: 201
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 126, 46

Conread position: 1-264
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 57, 35

Conread position: 1-269
Cow position:
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-274
Cow position:
Alignm length: 275
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 56

Conread position: 1-274
Cow position:
Alignm length: 275
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 141, 58

Conread position: 1-278
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 1-279
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 44

Conread position: 1-280
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 24

Conread position: 1-281
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-282
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 171

Conread position: 1-282
Cow position:
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 103

Conread position: 1-285
Cow position:
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-286
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 203

Conread position: 1-287
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 61, 46

Conread position: 1-288
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 1-291
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 46

Conread position: 1-292
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 136, 46

Conread position: 1-294
Cow position:
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 69

Conread position: 1-295
Cow position:
Alignm length: 296
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 46

Conread position: 1-295
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-296
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 108

Conread position: 1-300
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 58, 44

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 1-326
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 1-328
Cow position:
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 46

Conread position: 1-331
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 1-332
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 58

Conread position: 1-332
Cow position:
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-333
Cow position:
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 0

Conread position: 1-334
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-334
Cow position:
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 46

Conread position: 1-334
Cow position:
Alignm length: 336
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 230

Conread position: 1-334
Cow position:
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 41

Conread position: 1-335
Cow position:
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 49

Conread position: 1-336
Cow position:
Alignm length: 341
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 164

Conread position: 1-336
Cow position:
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-336
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 49

Conread position: 1-336
Cow position:
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 48

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 84

Conread position: 1-336
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 46

Conread position: 1-336
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 46

Conread position: 1-336
Cow position:
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 49

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 45

Conread position: 1-336
Cow position:
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 46

Conread position: 1-336
Cow position:
Alignm length: 338
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 111

Conread position: 1-336
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 44

Conread position: 1-336
Cow position:
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 46

Conread position: 1-336
Cow position:
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 46

Conread position: 1-336
Cow position:
Alignm length: 336
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 32

Conread position: 1-336
Cow position:
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-336
Cow position:
Alignm length: 341
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 93

Conread position: 1-336
Cow position:
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 1-336
Cow position:
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 46

Conread position: 1-336
Cow position:
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-336
Cow position:
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 24

Conread position: 1-336
Cow position:
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 1-336
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 1-336
Cow position:
Alignm length: 342
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 77

Conread position: 1-336
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-337
Cow position:
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 248

Conread position: 1-337
Cow position:
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 15

Conread position: 2-185
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 2-187
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 45

Conread position: 2-225
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 69, 51

Conread position: 2-266
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 261, 45

Conread position: 2-273
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 47

Conread position: 2-274
Cow position:
Alignm length: 274
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 35

Conread position: 2-282
Cow position:
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 45

Conread position: 2-291
Cow position:
Alignm length: 297
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 67, 45

Conread position: 2-323
Cow position:
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 2-328
Cow position:
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 45

Conread position: 2-331
Cow position:
Alignm length: 331
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 135, 45

Conread position: 2-333
Cow position:
Alignm length: 343
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-336
Cow position:
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 27

Conread position: 2-336
Cow position:
Alignm length: 335
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 3-156
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 148, 0

Conread position: 3-195
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 46

Conread position: 3-246
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 59, 44

Conread position: 3-261
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 3-266
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 41, 178

Conread position: 3-292
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 0

Conread position: 3-329
Cow position:
Alignm length: 330
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 3-335
Cow position:
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 103

Conread position: 3-336
Cow position:
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 39

Conread position: 3-336
Cow position:
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 42

Conread position: 3-336
Cow position:
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 34

Conread position: 4-141
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-184
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 4-187
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 54, 136

Conread position: 4-336
Cow position:
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 42

Conread position: 4-336
Cow position:
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 5-187
Cow position:
Alignm length: 184
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 179

Conread position: 5-300
Cow position:
Alignm length: 300
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 67

Conread position: 5-334
Cow position:
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 5-336
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 48

Conread position: 7-285
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 24

Conread position: 7-307
Cow position:
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 7-336
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 43

Conread position: 8-335
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 40

Conread position: 9-265
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 9-336
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 10-335
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 12-185
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 8

Conread position: 12-208
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 8

Conread position: 12-227
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 126, 8

Conread position: 12-253
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 71, 8

Conread position: 12-336
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 8

Conread position: 12-336
Cow position:
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 8

Conread position: 13-336
Cow position:
Alignm length: 333
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 7

Conread position: 15-295
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 21

Conread position: 15-305
Cow position:
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 15-335
Cow position:
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 32

Conread position: 16-336
Cow position:
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 31

Conread position: 24-336
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 25-287
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 144

Conread position: 25-336
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 25-336
Cow position:
Alignm length: 316
Alignm identity: 213
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 11, 22

Conread position: 25-336
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 26-175
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 21

Conread position: 26-208
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 31, 21

Conread position: 26-225
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 7

Conread position: 26-256
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 112, 15

Conread position: 26-282
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 62

Conread position: 26-304
Cow position:
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 21

Conread position: 26-309
Cow position:
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 34

Conread position: 26-335
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 26-336
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 166

Conread position: 27-243
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 113, 20

Conread position: 27-336
Cow position:
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 20

Conread position: 28-336
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 14, 23

Conread position: 28-336
Cow position:
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 260

Conread position: 28-336
Cow position:
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 19

Conread position: 30-167
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 33

Conread position: 30-295
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 24

Conread position: 31-286
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 28

Conread position: 31-318
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 18

Conread position: 31-335
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 176

Conread position: 32-287
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 33-278
Cow position:
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 35-336
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 11

Conread position: 35-336
Cow position:
Alignm length: 305
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 30, 146

Conread position: 36-286
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 83

Conread position: 37-336
Cow position:
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 226

Conread position: 38-310
Cow position:
Alignm length: 279
Alignm identity: 205
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 7, 145

Conread position: 39-336
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 5, 30

Conread position: 42-226
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 42-271
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 74

Conread position: 42-286
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 115

Conread position: 42-292
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 42-294
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 18

Conread position: 42-336
Cow position:
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 43-292
Cow position:
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 43-307
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 40

Conread position: 43-336
Cow position:
Alignm length: 294
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 45-244
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 171

Conread position: 45-272
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 45-331
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 17, 141

Conread position: 48-225
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 23, 5

Conread position: 48-285
Cow position:
Alignm length: 252
Alignm identity: 192
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 11, 64

Conread position: 48-294
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 11

Conread position: 48-334
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 121

Conread position: 48-336
Cow position:
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 8

Conread position: 49-282
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 113

Conread position: 49-292
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 90

Conread position: 49-334
Cow position:
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 228

Conread position: 49-336
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 198

Conread position: 49-336
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 49-354
Cow position:
Alignm length: 307
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 100

Conread position: 50-242
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 87, 54

Conread position: 50-278
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 17

Conread position: 50-281
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 21, 64

Conread position: 50-286
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 88, 16

Conread position: 50-294
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 101, 0

Conread position: 50-331
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 144

Conread position: 50-336
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 7

Conread position: 50-336
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 50-336
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 139

Conread position: 50-342
Cow position:
Alignm length: 298
Alignm identity: 216
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 77, 67

Conread position: 51-218
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 14

Conread position: 51-286
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 131

Conread position: 51-303
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 89, 17

Conread position: 51-335
Cow position:
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 259

Conread position: 51-336
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 77

Conread position: 52-334
Cow position:
Alignm length: 284
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 113

Conread position: 52-334
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 230, 7

Conread position: 52-336
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 53-229
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 120

Conread position: 53-243
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 107

Conread position: 53-267
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 113

Conread position: 53-268
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 131

Conread position: 53-332
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 127

Conread position: 53-336
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 63, 86

Conread position: 54-242
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 129

Conread position: 55-195
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 55-279
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 55-327
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 22

Conread position: 55-336
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 12, 99

Conread position: 55-336
Cow position:
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 112

Conread position: 55-336
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 210, 123

Conread position: 56-203
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 63

Conread position: 56-240
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 56-278
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 82, 118

Conread position: 56-295
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 56-336
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 36, 15

Conread position: 56-336
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 11, 108

Conread position: 57-288
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 114

Conread position: 57-294
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 54

Conread position: 57-336
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 46

Conread position: 57-336
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 46

Conread position: 57-336
Cow position:
Alignm length: 280
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 57-336
Cow position:
Alignm length: 284
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 52

Conread position: 57-336
Cow position:
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 71

Conread position: 58-269
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 20

Conread position: 59-265
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 31

Conread position: 59-304
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 113

Conread position: 59-336
Cow position:
Alignm length: 282
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 69

Conread position: 59-336
Cow position:
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 61-295
Cow position:
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 49

Conread position: 61-304
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 111

Conread position: 61-336
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 32

Conread position: 70-336
Cow position:
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 109

Conread position: 71-337
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 62, 26

Conread position: 72-278
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 159, 112

Conread position: 73-336
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 73-336
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 93

Conread position: 75-225
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 130

Conread position: 77-236
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 41

Conread position: 77-268
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 77-294
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 56, 33

Conread position: 77-334
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 103

Conread position: 78-335
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 40

Conread position: 78-355
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 73

Conread position: 80-336
Cow position:
Alignm length: 257
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 81-335
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 177

Show alignments to all cow chromosomes.