Cow genome map


           Conread name:
           Tra1-TCH01A060005
        

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-167
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 101
               

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               136, 46
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               136, 46
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               139, 46
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               45, 133
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               1-265
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               1-279
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               70, 177
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               6, 52
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 44
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               123, 46
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 94
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 46
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               141, 46
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 273
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               136, 7
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 46
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 46
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 68
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 32
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 177
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               64, 48
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 88
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               2-116
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               167, 51
               

               Conread position:
               2-229
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-263
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               69, 45
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               2-292
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 258
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 45
               

               Conread position:
               3-257
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               3-292
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 51
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               40, 101
               

               Conread position:
               3-336
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 50
               

               Conread position:
               3-336
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 57
               

               Conread position:
               5-161
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 100
               

               Conread position:
               5-336
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 31
               

               Conread position:
               7-278
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 184
               

               Conread position:
               7-336
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               8-230
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               134, 41
               

               Conread position:
               8-242
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               134, 41
               

               Conread position:
               9-267
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               44, 167
               

               Conread position:
               9-334
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 61
               

               Conread position:
               9-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               10-168
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               10-260
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               11-336
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               12-300
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               12-336
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 8
               

               Conread position:
               13-333
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 7
               

               Conread position:
               15-274
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               17-336
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               18-337
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               21-261
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               21-301
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 25
               

               Conread position:
               22-294
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               22-336
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               49, 6
               

               Conread position:
               23-336
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               24-295
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               25-235
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 160
               

               Conread position:
               25-291
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               26-295
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               26-334
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 27
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 17
               

               Conread position:
               27-294
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               28-295
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               22, 5
               

               Conread position:
               29-312
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 138
               

               Conread position:
               29-329
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               42, 144
               

               Conread position:
               30-243
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 13
               

               Conread position:
               30-336
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               31-308
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               31-335
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               31-336
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               32-265
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               32-336
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               101, 154
               

               Conread position:
               33-286
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               34-163
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               36-322
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               12, 197
               

               Conread position:
               38-335
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               42-203
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               42-288
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               232, 91
               

               Conread position:
               42-336
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               44-274
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               44-336
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               45-336
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               7, 141
               

               Conread position:
               47-259
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               47-294
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               47-336
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               47-336
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               48-269
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               48-304
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               48-336
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               48-336
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               48-336
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               49-226
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               49-239
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               49-280
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 99
               

               Conread position:
               49-336
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               50-241
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               50-265
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               22, 148
               

               Conread position:
               50-295
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               50-336
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               50-336
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               50-336
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               51-208
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               51-257
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 119
               

               Conread position:
               51-292
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               51-296
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 60
               

               Conread position:
               51-309
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               20, 128
               

               Conread position:
               53-336
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               54-253
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               54-282
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               54-336
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 55
               

               Conread position:
               55-243
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               55-257
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               55-265
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               55-292
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               87, 69
               

               Conread position:
               55-307
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               55-332
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               55-336
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               55-336
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 156
               

               Conread position:
               57-218
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 53
               

               Conread position:
               57-220
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               57-318
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               57-326
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               57-336
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 118
               

               Conread position:
               57-336
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               57-336
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 0
               

               Conread position:
               57-336
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               57-336
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               58-265
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 122
               

               Conread position:
               59-229
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               59-262
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               198, 106
               

               Conread position:
               59-295
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               200, 87
               

               Conread position:
               59-324
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               14, 122
               

               Conread position:
               60-294
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               61-158
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               66-294
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               67-267
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               68-336
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               70-336
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 109
               

               Conread position:
               71-336
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 189
               

               Conread position:
               73-336
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 55
               

               Conread position:
               76-336
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 184
               

               Conread position:
               76-336
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               76-336
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               64, 95
               

               Conread position:
               84-335
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               175, 84
               

               Conread position:
               91-336
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 222
               

               Conread position:
               98-336
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               
Show alignments to all cow chromosomes.