Non-Coding RNA Search

Cow genome map


           Conread name:
           Tra1-TCH01A060005
        

               Conread position:
               1-131
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               1-182
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               141, 45
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-226
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               61, 189
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               194, 46
               

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               136, 44
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               141, 49
               

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               141, 48
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               136, 58
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 178
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 57
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               1-301
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 108
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 158
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               136, 59
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 170
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 48
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 46
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               154, 109
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               141, 49
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 48
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 58
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               72, 57
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               111, 49
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 137
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 41
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               1-337
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 163
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 63
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 23
               

               Conread position:
               1-350
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               2-179
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               2-245
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               2-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 42
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 178
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 44
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               3-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               3-275
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               3-336
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               4-141
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               4-285
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-331
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               279, 43
               

               Conread position:
               4-336
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 43
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               5-336
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               5-336
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-236
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               6-290
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               253, 26
               

               Conread position:
               6-336
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               7-231
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               49, 187
               

               Conread position:
               7-272
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               7-293
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 83
               

               Conread position:
               7-314
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               7-336
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               135, 42
               

               Conread position:
               7-336
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 42
               

               Conread position:
               10-131
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               10-209
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 100
               

               Conread position:
               12-286
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               12-286
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               12-336
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               13-219
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               15-196
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               15-257
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               15-288
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 32
               

               Conread position:
               15-290
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 155
               

               Conread position:
               15-292
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               15-334
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 66
               

               Conread position:
               15-336
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               16-336
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 93
               

               Conread position:
               16-336
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               19-295
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 200
               

               Conread position:
               22-289
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               22-336
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               24-262
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               119, 35
               

               Conread position:
               25-332
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               26-262
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               26-326
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               26-336
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               28-305
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               28-336
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               11, 167
               

               Conread position:
               30-387
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               189, 46
               

               Conread position:
               31-293
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               31-317
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 12
               

               Conread position:
               31-336
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               41, 35
               

               Conread position:
               31-336
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 35
               

               Conread position:
               32-209
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               32-243
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               32-309
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               32-332
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 29
               

               Conread position:
               36-222
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               36-232
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               36-307
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               37-334
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               38-284
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 101
               

               Conread position:
               39-336
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               42-292
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 89
               

               Conread position:
               42-333
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 19
               

               Conread position:
               42-336
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               43-220
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               43-274
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               43-294
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               43-336
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               95, 9
               

               Conread position:
               47-220
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               47-336
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               48-294
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               48-328
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               173, 137
               

               Conread position:
               48-336
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               49-253
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               49-277
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               49-282
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               13, 139
               

               Conread position:
               49-304
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               17, 137
               

               Conread position:
               49-336
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 155
               

               Conread position:
               50-256
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               50-286
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               50-333
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               92, 121
               

               Conread position:
               51-323
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 258
               

               Conread position:
               51-336
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 245
               

               Conread position:
               51-336
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               52-292
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               85, 7
               

               Conread position:
               52-295
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               52-336
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               57, 99
               

               Conread position:
               52-336
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 114
               

               Conread position:
               54-205
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               55-285
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               55-335
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               6, 117
               

               Conread position:
               55-336
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               7, 179
               

               Conread position:
               55-336
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 13
               

               Conread position:
               55-376
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               10, 125
               

               Conread position:
               56-336
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               57-236
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               57-286
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               57-296
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 139
               

               Conread position:
               57-329
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               103, 112
               

               Conread position:
               57-334
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 149
               

               Conread position:
               57-336
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               57-336
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 53
               

               Conread position:
               58-336
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 106
               

               Conread position:
               58-336
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               59-266
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               74, 28
               

               Conread position:
               60-335
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 202
               

               Conread position:
               60-336
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               67-198
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               68-192
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-285
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               70-334
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               68, 110
               

               Conread position:
               70-336
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               72-336
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               76-336
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 100
               

               Conread position:
               77-336
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               78-286
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               83-270
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               54, 96
               

               Conread position:
               83-334
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               83-336
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               83-336
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               7, 46
               

               Conread position:
               96-336
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-131
Cow position:
Alignm length:	133
Alignm identity:	102
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	54, 41
Conread position:	1-179
Cow position:
Alignm length:	180
Alignm identity:	134
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	64, 46
Conread position:	1-182
Cow position:
Alignm length:	185
Alignm identity:	145
Alignm E-value:	9e-38
Alignm gaps (pig, cow):	69, 0
Conread position:	1-186
Cow position:
Alignm length:	190
Alignm identity:	140
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	45, 59
Conread position:	1-190
Cow position:
Alignm length:	191
Alignm identity:	140
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	70, 0
Conread position:	1-201
Cow position:
Alignm length:	201
Alignm identity:	141
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	44, 0
Conread position:	1-220
Cow position:
Alignm length:	221
Alignm identity:	150
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	141, 45
Conread position:	1-225
Cow position:
Alignm length:	225
Alignm identity:	160
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	56, 0
Conread position:	1-226
Cow position:
Alignm length:	229
Alignm identity:	176
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	44, 115
Conread position:	1-227
Cow position:
Alignm length:	233
Alignm identity:	168
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	61, 189
Conread position:	1-229
Cow position:
Alignm length:	231
Alignm identity:	160
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	70, 48
Conread position:	1-236
Cow position:
Alignm length:	237
Alignm identity:	172
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	38, 24
Conread position:	1-243
Cow position:
Alignm length:	244
Alignm identity:	179
Alignm E-value:	4.99983e-42
Alignm gaps (pig, cow):	194, 46
Conread position:	1-259
Cow position:
Alignm length:	261
Alignm identity:	173
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	136, 44
Conread position:	1-270
Cow position:
Alignm length:	271
Alignm identity:	180
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	141, 49
Conread position:	1-272
Cow position:
Alignm length:	274
Alignm identity:	207
Alignm E-value:	0
Alignm gaps (pig, cow):	57, 77
Conread position:	1-276
Cow position:
Alignm length:	277
Alignm identity:	224
Alignm E-value:	0
Alignm gaps (pig, cow):	45, 68
Conread position:	1-277
Cow position:
Alignm length:	278
Alignm identity:	207
Alignm E-value:	0
Alignm gaps (pig, cow):	31, 48
Conread position:	1-282
Cow position:
Alignm length:	283
Alignm identity:	190
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	141, 48
Conread position:	1-291
Cow position:
Alignm length:	292
Alignm identity:	210
Alignm E-value:	5.00264e-43
Alignm gaps (pig, cow):	136, 58