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Cow genome map

           
Conread name:
           
Tra1-TCH01A060005
        

               
Conread position:
               
1-143
               

               
Cow position:
               
chr19:42517246-42517388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr19:4092523-4092358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 138
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr19:47453441-47453282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr19:21816976-21816798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr19:10698237-10698051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr19:24759873-24760078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr19:10242592-10242387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr19:38723836-38724052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
195, 56
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr19:22043343-22043549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr19:48960407-48960180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr19:6079349-6079579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr19:7158711-7158953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr19:35846908-35846672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr19:20984764-20984996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr19:35762242-35762483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr19:33055906-33056136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr19:42904020-42903787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr19:6531896-6531651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr19:19919452-19919714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr19:32451094-32450822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr19:11565151-11565407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr19:3621439-3621168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 46
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr19:21378460-21378726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr19:41946192-41945926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr19:5912947-5913217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr19:8683325-8683045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr19:10545693-10545977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr19:10213681-10213401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr19:15767212-15766946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr19:21065771-21065509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr19:41584978-41584704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 43
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr19:47671753-47671482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr19:7668711-7668424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
65, 136
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr19:11376393-11376683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 178
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr19:19662057-19661764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr19:25652747-25653035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 45
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr19:27612161-27612445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr19:36059947-36059654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr19:55952143-55952427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr19:47118487-47118790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr19:6609988-6610298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr19:20693509-20693197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr19:35742171-35741851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 46
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr19:12327372-12327704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr19:13129885-13129582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr19:43441178-43440850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 164
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr19:10172014-10171673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr19:34620019-34620351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr19:51401001-51401328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr19:1505138-1504827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
63, 126
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:729733-730050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 45
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:7028584-7028254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:8033757-8033419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:8375293-8375621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 178
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:14593065-14592734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 0
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:14928647-14928992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:15499524-15499192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:18786312-18786645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 117
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:21199148-21198807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:22765632-22765297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:23786203-23785869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 46
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:24358232-24358543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:24801551-24801884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:28014488-28014161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:29367858-29367540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:30540049-30540381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:31595310-31594979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:35540304-35539985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 46
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:37646826-37647161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:39057251-39056925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:46918859-46918521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:56150054-56150377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr19:24145027-24144683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 40
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr19:2734459-2734114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr19:7404368-7404535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr19:36245485-36245717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr19:10186513-10186230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr19:17795908-17795573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr19:35622366-35622044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr19:39576560-39576889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr19:43702701-43703022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr19:51185431-51185168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
259, 44
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr19:33033428-33033716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr19:16694024-16694352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr19:4448550-4448217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 78
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr19:36176756-36176420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr19:47727566-47727888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr19:15719612-15719787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr19:16621345-16621574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr19:51230818-51231057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr19:15887314-15887594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
4-331
               

               
Cow position:
               
chr19:55967696-55968003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr19:19673422-19673099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr19:38392811-38392476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-161
               

               
Cow position:
               
chr19:52158543-52158386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr19:18129561-18129406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr19:15068003-15068313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr19:56094544-56094296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 88
               

               
Conread position:
               
7-279
               

               
Cow position:
               
chr19:20935757-20935493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr19:5185245-5185573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr19:50177835-50177510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr19:29754904-29755249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr19:14348018-14347731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr19:11171217-11171537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr19:16567154-16566839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
12-335
               

               
Cow position:
               
chr19:33932150-33932462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 48
               

               
Conread position:
               
13-214
               

               
Cow position:
               
chr19:50298364-50298167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
15-175
               

               
Cow position:
               
chr19:25807305-25807465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
18-282
               

               
Cow position:
               
chr19:419883-419611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
20-185
               

               
Cow position:
               
chr19:35457657-35457491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr19:30533926-30533622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
22-161
               

               
Cow position:
               
chr19:30927808-30927671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
22-225
               

               
Cow position:
               
chr19:55688711-55688912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
22-295
               

               
Cow position:
               
chr19:39361128-39360861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
25-334
               

               
Cow position:
               
chr19:4445636-4445938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
26-219
               

               
Cow position:
               
chr19:4329065-4329250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
26-263
               

               
Cow position:
               
chr19:54182758-54182997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
26-269
               

               
Cow position:
               
chr19:32754511-32754262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr19:22799093-22799337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
26-315
               

               
Cow position:
               
chr19:4251986-4252271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
26-329
               

               
Cow position:
               
chr19:6417581-6417287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
26-336
               

               
Cow position:
               
chr19:7978578-7978878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
28-333
               

               
Cow position:
               
chr19:23222616-23222326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
29-294
               

               
Cow position:
               
chr19:3496189-3496452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
31-286
               

               
Cow position:
               
chr19:33508624-33508874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
31-335
               

               
Cow position:
               
chr19:345723-345406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr19:22134163-22134377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
32-327
               

               
Cow position:
               
chr19:18842990-18843272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
35-336
               

               
Cow position:
               
chr19:29477276-29476977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 144
               

               
Conread position:
               
35-336
               

               
Cow position:
               
chr19:56043510-56043206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
36-336
               

               
Cow position:
               
chr19:6516241-6515941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
38-322
               

               
Cow position:
               
chr19:34425560-34425276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
39-280
               

               
Cow position:
               
chr19:990447-990673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
204, 36
               

               
Conread position:
               
39-330
               

               
Cow position:
               
chr19:29627405-29627681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
40-332
               

               
Cow position:
               
chr19:7136938-7136645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chr19:25864951-25865176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
45-271
               

               
Cow position:
               
chr19:25851859-25852087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
45-326
               

               
Cow position:
               
chr19:25851515-25851800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
47-279
               

               
Cow position:
               
chr19:21335641-21335875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
47-288
               

               
Cow position:
               
chr19:36380208-36379977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
47-336
               

               
Cow position:
               
chr19:34971324-34971033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
48-335
               

               
Cow position:
               
chr19:17273764-17274035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
48-336
               

               
Cow position:
               
chr19:11065838-11066128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
48-336
               

               
Cow position:
               
chr19:38596586-38596295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
49-275
               

               
Cow position:
               
chr19:6880912-6881137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
49-336
               

               
Cow position:
               
chr19:46180852-46181129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 26
               

               
Conread position:
               
50-203
               

               
Cow position:
               
chr19:15442728-15442574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
50-225
               

               
Cow position:
               
chr19:25769627-25769452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
50-289
               

               
Cow position:
               
chr19:52381493-52381259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
50-294
               

               
Cow position:
               
chr19:14992958-14993198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
5, 164
               

               
Conread position:
               
50-329
               

               
Cow position:
               
chr19:23341000-23340723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
17, 222
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr19:2771050-2771326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 159
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr19:2821546-2821259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 211
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr19:18695144-18695434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr19:38501921-38502105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
51-236
               

               
Cow position:
               
chr19:24137224-24137038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
51-258
               

               
Cow position:
               
chr19:11758643-11758843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
51-282
               

               
Cow position:
               
chr19:10093255-10093029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
90, 129
               

               
Conread position:
               
51-291
               

               
Cow position:
               
chr19:1153174-1152949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
51-320
               

               
Cow position:
               
chr19:25711356-25711634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
52-277
               

               
Cow position:
               
chr19:26706246-26706466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
52-292
               

               
Cow position:
               
chr19:33306268-33306028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr19:5656156-5656430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr19:44838958-44839214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
186, 34
               

               
Conread position:
               
53-316
               

               
Cow position:
               
chr19:55899277-55899539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
53-336
               

               
Cow position:
               
chr19:13636000-13635719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
54-264
               

               
Cow position:
               
chr19:10706245-10706034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
54-333
               

               
Cow position:
               
chr19:25696251-25696522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
55-207
               

               
Cow position:
               
chr19:18325329-18325480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
55-278
               

               
Cow position:
               
chr19:1898276-1898493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
55-292
               

               
Cow position:
               
chr19:9703880-9704106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
55-321
               

               
Cow position:
               
chr19:24192345-24192099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
55-332
               

               
Cow position:
               
chr19:736881-736605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
55-336
               

               
Cow position:
               
chr19:12234119-12233832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr19:8209432-8209623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
57-247
               

               
Cow position:
               
chr19:23244565-23244751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
57-270
               

               
Cow position:
               
chr19:9209469-9209248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
57-334
               

               
Cow position:
               
chr19:31378645-31378933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
57-334
               

               
Cow position:
               
chr19:56383094-56382831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
57-335
               

               
Cow position:
               
chr19:38340023-38340290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
57-336
               

               
Cow position:
               
chr19:54294633-54294903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
58-334
               

               
Cow position:
               
chr19:39751433-39751167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
59-334
               

               
Cow position:
               
chr19:48409465-48409198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
59-354
               

               
Cow position:
               
chr19:37562052-37562335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
60-336
               

               
Cow position:
               
chr19:31874066-31873787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
60-336
               

               
Cow position:
               
chr19:36976960-36977235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
61-336
               

               
Cow position:
               
chr19:32955839-32955569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 134
               

               
Conread position:
               
63-315
               

               
Cow position:
               
chr19:25637547-25637798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
63-336
               

               
Cow position:
               
chr19:51267844-51267586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
64-317
               

               
Cow position:
               
chr19:30925373-30925616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
66-243
               

               
Cow position:
               
chr19:25835406-25835583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
66-304
               

               
Cow position:
               
chr19:53037206-53037441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
70-239
               

               
Cow position:
               
chr19:37423326-37423499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
70-291
               

               
Cow position:
               
chr19:39794906-39794682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
70-295
               

               
Cow position:
               
chr19:9387578-9387355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
72-281
               

               
Cow position:
               
chr19:2825025-2824815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
72-332
               

               
Cow position:
               
chr19:19500419-19500677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
72-336
               

               
Cow position:
               
chr19:43358010-43358270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
76-241
               

               
Cow position:
               
chr19:52136756-52136921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-332
               

               
Cow position:
               
chr19:54942909-54942661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
179, 90
               

               
Conread position:
               
78-336
               

               
Cow position:
               
chr19:7612555-7612309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
81-261
               

               
Cow position:
               
chr19:34911819-34911640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
85-336
               

               
Cow position:
               
chr19:24956517-24956748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
90-336
               

               
Cow position:
               
chr19:4587798-4588040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 102
               

               
Conread position:
               
92-336
               

               
Cow position:
               
chr19:55357980-55357737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
74, 168
               
Show alignments to all cow chromosomes.