Cow genome map

Conread name: Tra1-TCH01A060005

Conread position: 1-119
Cow position: chr2:47015312-47015430 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-129
Cow position: chr2:40257391-40257520 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-138
Cow position: chr2:45642464-45642604 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-145
Cow position: chr2:44222845-44222701 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 57

Conread position: 1-161
Cow position: chr2:47147929-47147772 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 46

Conread position: 1-162
Cow position: chr2:14313220-14313055 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 56

Conread position: 1-165
Cow position: chr2:17805741-17805904 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 69, 103

Conread position: 1-176
Cow position: chr2:7573483-7573652 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 40

Conread position: 1-180
Cow position: chr2:45542378-45542551 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 98, 45

Conread position: 1-185
Cow position: chr2:70781115-70780935 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 136, 46

Conread position: 1-189
Cow position: chr2:38785578-38785768 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 44

Conread position: 1-194
Cow position: chr2:8354924-8355112 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 1-198
Cow position: chr2:30144739-30144552 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 107, 0

Conread position: 1-208
Cow position: chr2:4458325-4458120 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 48

Conread position: 1-208
Cow position: chr2:57065454-57065249 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 48

Conread position: 1-214
Cow position: chr2:58057085-58056879 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 35

Conread position: 1-217
Cow position: chr2:1762816-1762600 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 159, 77

Conread position: 1-217
Cow position: chr2:19246538-19246754 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 47

Conread position: 1-218
Cow position: chr2:70495293-70495081 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 24

Conread position: 1-220
Cow position: chr2:11610809-11610588 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 37

Conread position: 1-224
Cow position: chr2:827590-827807 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 55, 148

Conread position: 1-225
Cow position: chr2:16505455-16505674 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 69, 35

Conread position: 1-226
Cow position: chr2:1638625-1638400 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-236
Cow position: chr2:44051332-44051095 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 45

Conread position: 1-241
Cow position: chr2:19294615-19294388 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 44

Conread position: 1-243
Cow position: chr2:36488985-36489224 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 48

Conread position: 1-244
Cow position: chr2:47624385-47624614 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 1-249
Cow position: chr2:38362344-38362593 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 46

Conread position: 1-252
Cow position: chr2:39368846-39368590 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 53, 40

Conread position: 1-253
Cow position: chr2:55960590-55960833 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 46

Conread position: 1-260
Cow position: chr2:68716647-68716901 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-261
Cow position: chr2:16428375-16428634 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 120

Conread position: 1-262
Cow position: chr2:80963625-80963879 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 60, 46

Conread position: 1-263
Cow position: chr2:6697474-6697728 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 46

Conread position: 1-263
Cow position: chr2:13604490-13604230 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 58

Conread position: 1-263
Cow position: chr2:34535136-34535393 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 67, 43

Conread position: 1-267
Cow position: chr2:17114709-17114975 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 1-270
Cow position: chr2:62644608-62644357 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 142, 46

Conread position: 1-273
Cow position: chr2:46331084-46330811 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-280
Cow position: chr2:84480480-84480772 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 60

Conread position: 1-281
Cow position: chr2:17967008-17967286 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 20

Conread position: 1-281
Cow position: chr2:25597474-25597746 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 260, 24

Conread position: 1-283
Cow position: chr2:45666054-45665778 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 1-288
Cow position: chr2:1658518-1658239 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 192

Conread position: 1-288
Cow position: chr2:63568387-63568112 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 24

Conread position: 1-292
Cow position: chr2:17444817-17444529 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 43, 82

Conread position: 1-292
Cow position: chr2:36723045-36722758 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 141, 32

Conread position: 1-292
Cow position: chr2:52171277-52170987 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 177, 44

Conread position: 1-292
Cow position: chr2:67595999-67596281 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 24

Conread position: 1-293
Cow position: chr2:11617116-11616834 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 36

Conread position: 1-293
Cow position: chr2:39501053-39500767 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 118

Conread position: 1-294
Cow position: chr2:41248592-41248302 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 185

Conread position: 1-294
Cow position: chr2:42183393-42183105 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 70, 126

Conread position: 1-294
Cow position: chr2:46745944-46745656 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 46

Conread position: 1-295
Cow position: chr2:79937-80226 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 1-295
Cow position: chr2:24434259-24434552 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 70, 24

Conread position: 1-295
Cow position: chr2:25928478-25928186 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 6, 46

Conread position: 1-295
Cow position: chr2:27173390-27173100 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-299
Cow position: chr2:33554149-33554431 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 109

Conread position: 1-304
Cow position: chr2:47115898-47116189 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 46

Conread position: 1-308
Cow position: chr2:54789795-54789498 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 15

Conread position: 1-315
Cow position: chr2:39593358-39593046 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 48

Conread position: 1-317
Cow position: chr2:41019190-41019490 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 52

Conread position: 1-331
Cow position: chr2:39263511-39263189 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 46

Conread position: 1-332
Cow position: chr2:4254514-4254840 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 48

Conread position: 1-332
Cow position: chr2:9063295-9062966 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 60

Conread position: 1-333
Cow position: chr2:45784758-45784431 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 95

Conread position: 1-333
Cow position: chr2:70896055-70895724 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 44

Conread position: 1-334
Cow position: chr2:37920764-37921084 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 35

Conread position: 1-334
Cow position: chr2:42801061-42800744 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-335
Cow position: chr2:21714-22046 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 24

Conread position: 1-335
Cow position: chr2:988714-988384 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-335
Cow position: chr2:7720888-7721208 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 24

Conread position: 1-335
Cow position: chr2:9173251-9173567 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 69, 25

Conread position: 1-335
Cow position: chr2:21284954-21284632 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 46

Conread position: 1-335
Cow position: chr2:26438703-26439033 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 46

Conread position: 1-335
Cow position: chr2:37009431-37009111 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-335
Cow position: chr2:42226245-42226577 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 133

Conread position: 1-335
Cow position: chr2:42837213-42837542 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 48

Conread position: 1-335
Cow position: chr2:74260479-74260152 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 1-336
Cow position: chr2:549306-549627 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 46

Conread position: 1-336
Cow position: chr2:2099553-2099886 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 1-336
Cow position: chr2:2761014-2761347 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 141, 49

Conread position: 1-336
Cow position: chr2:10640874-10640544 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 17, 26

Conread position: 1-336
Cow position: chr2:15298560-15298233 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 77

Conread position: 1-336
Cow position: chr2:18061607-18061942 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 113

Conread position: 1-336
Cow position: chr2:18997740-18997430 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-336
Cow position: chr2:19212034-19212351 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-336
Cow position: chr2:20900442-20900777 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 49

Conread position: 1-336
Cow position: chr2:21644430-21644761 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 19

Conread position: 1-336
Cow position: chr2:22371931-22372252 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 46

Conread position: 1-336
Cow position: chr2:24007445-24007128 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 89

Conread position: 1-336
Cow position: chr2:25283136-25282798 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 1-336
Cow position: chr2:29269089-29268756 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 171

Conread position: 1-336
Cow position: chr2:31401424-31401755 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 48

Conread position: 1-336
Cow position: chr2:31783951-31783636 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 34

Conread position: 1-336
Cow position: chr2:32115101-32114758 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 331

Conread position: 1-336
Cow position: chr2:36055778-36056105 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 52

Conread position: 1-336
Cow position: chr2:36105289-36104948 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 16

Conread position: 1-336
Cow position: chr2:38273571-38273232 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 174

Conread position: 1-336
Cow position: chr2:38628930-38628608 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 1-336
Cow position: chr2:39052005-39051675 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 130

Conread position: 1-336
Cow position: chr2:41147889-41147568 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 44

Conread position: 1-336
Cow position: chr2:41185075-41184758 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-336
Cow position: chr2:41452254-41451920 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 27

Conread position: 1-336
Cow position: chr2:42362766-42363099 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 1-336
Cow position: chr2:44081458-44081141 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 45, 67

Conread position: 1-336
Cow position: chr2:44191501-44191176 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 100

Conread position: 1-336
Cow position: chr2:45499181-45499505 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 46

Conread position: 1-336
Cow position: chr2:45912611-45912946 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 225

Conread position: 1-336
Cow position: chr2:46227480-46227160 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 1-336
Cow position: chr2:48896316-48895981 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 137, 49

Conread position: 1-336
Cow position: chr2:50445923-50445586 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 1-336
Cow position: chr2:52332616-52332934 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 47

Conread position: 1-336
Cow position: chr2:52344772-52344454 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 24

Conread position: 1-336
Cow position: chr2:53650045-53649725 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 56

Conread position: 1-336
Cow position: chr2:57921088-57921419 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 49

Conread position: 1-336
Cow position: chr2:58074323-58074657 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 45

Conread position: 1-336
Cow position: chr2:59397032-59397367 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 81

Conread position: 1-336
Cow position: chr2:65269669-65270002 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 76

Conread position: 1-336
Cow position: chr2:69238300-69237965 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 1-336
Cow position: chr2:70704279-70703950 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 250

Conread position: 1-336
Cow position: chr2:77157324-77157662 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 1-336
Cow position: chr2:82580907-82581238 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 189

Conread position: 1-337
Cow position: chr2:13001820-13001506 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-342
Cow position: chr2:38965641-38965307 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 109

Conread position: 1-342
Cow position: chr2:55877408-55877088 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 12

Conread position: 1-347
Cow position: chr2:44170580-44170236 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 56

Conread position: 1-348
Cow position: chr2:1073541-1073221 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 46

Conread position: 2-149
Cow position: chr2:80865834-80865979 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 2-229
Cow position: chr2:46120620-46120838 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 196, 111

Conread position: 2-239
Cow position: chr2:16564706-16564472 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 135, 45

Conread position: 2-249
Cow position: chr2:23847805-23848042 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 58

Conread position: 2-259
Cow position: chr2:44229670-44229921 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 141, 73

Conread position: 2-259
Cow position: chr2:54971196-54970953 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 43

Conread position: 2-263
Cow position: chr2:15329407-15329167 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 2-269
Cow position: chr2:66480166-66480419 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 60, 45

Conread position: 2-276
Cow position: chr2:53851457-53851185 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-280
Cow position: chr2:992175-991920 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 31

Conread position: 2-280
Cow position: chr2:15597455-15597715 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 2-282
Cow position: chr2:38747679-38747422 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 2-286
Cow position: chr2:46994736-46995010 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 56

Conread position: 2-286
Cow position: chr2:51799302-51799579 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 126, 0

Conread position: 2-292
Cow position: chr2:51594785-51594501 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 45

Conread position: 2-295
Cow position: chr2:4273246-4273537 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 69, 164

Conread position: 2-295
Cow position: chr2:46245415-46245705 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 2-298
Cow position: chr2:61974820-61974524 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 45

Conread position: 2-322
Cow position: chr2:45535486-45535176 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 2-334
Cow position: chr2:46033355-46033018 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 45

Conread position: 2-334
Cow position: chr2:53532792-53533113 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 45

Conread position: 2-336
Cow position: chr2:192446-192764 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-336
Cow position: chr2:1300374-1300688 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 24

Conread position: 2-336
Cow position: chr2:15674563-15674238 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 46

Conread position: 2-336
Cow position: chr2:23493557-23493227 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 45

Conread position: 2-336
Cow position: chr2:29955302-29955629 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 140, 47

Conread position: 2-336
Cow position: chr2:34695265-34694930 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 192

Conread position: 2-336
Cow position: chr2:69747596-69747932 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 176

Conread position: 3-165
Cow position: chr2:54810833-54810995 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-188
Cow position: chr2:29907172-29907362 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 3-194
Cow position: chr2:78249758-78249567 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-202
Cow position: chr2:42365049-42364853 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 46

Conread position: 3-209
Cow position: chr2:19328566-19328365 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 172, 0

Conread position: 3-229
Cow position: chr2:2382535-2382764 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 58

Conread position: 3-280
Cow position: chr2:43577778-43578049 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-282
Cow position: chr2:21003193-21002933 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 41

Conread position: 3-285
Cow position: chr2:14555729-14556008 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 58, 23

Conread position: 3-286
Cow position: chr2:18621429-18621148 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 124

Conread position: 3-292
Cow position: chr2:16839655-16839369 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 174

Conread position: 3-294
Cow position: chr2:46189077-46189356 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 3-295
Cow position: chr2:42927431-42927718 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-328
Cow position: chr2:46344710-46344382 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 139, 190

Conread position: 3-331
Cow position: chr2:43994954-43994631 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 107

Conread position: 3-334
Cow position: chr2:16514802-16514483 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 45

Conread position: 3-336
Cow position: chr2:11806338-11806011 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 44

Conread position: 3-336
Cow position: chr2:19494233-19493896 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 178

Conread position: 3-336
Cow position: chr2:44065595-44065284 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 7

Conread position: 3-336
Cow position: chr2:44482629-44482954 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 44

Conread position: 3-336
Cow position: chr2:80324832-80325155 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 45

Conread position: 3-342
Cow position: chr2:56828549-56828882 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 53

Conread position: 4-218
Cow position: chr2:60315323-60315537 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 33

Conread position: 4-234
Cow position: chr2:40488830-40488605 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 66, 33

Conread position: 4-238
Cow position: chr2:21078600-21078367 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 207

Conread position: 4-244
Cow position: chr2:84983260-84983018 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 55, 46

Conread position: 4-286
Cow position: chr2:13684717-13684448 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 54

Conread position: 4-294
Cow position: chr2:42309533-42309819 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 28

Conread position: 4-336
Cow position: chr2:7533750-7534087 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 26

Conread position: 5-210
Cow position: chr2:46343127-46343325 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 138, 43

Conread position: 5-261
Cow position: chr2:72183475-72183723 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 104

Conread position: 5-295
Cow position: chr2:77378261-77377969 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 32

Conread position: 6-336
Cow position: chr2:42255451-42255123 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 41

Conread position: 7-282
Cow position: chr2:51406683-51406409 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 53

Conread position: 7-336
Cow position: chr2:30959917-30959586 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 7-336
Cow position: chr2:57975211-57974889 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 42

Conread position: 7-336
Cow position: chr2:82311183-82311503 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 109, 24

Conread position: 8-289
Cow position: chr2:28456262-28455989 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 134, 17

Conread position: 8-336
Cow position: chr2:39384860-39385170 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 9-227
Cow position: chr2:25757616-25757831 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 129, 11

Conread position: 9-282
Cow position: chr2:36436218-36435947 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 9-317
Cow position: chr2:6952209-6951921 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 62

Conread position: 9-336
Cow position: chr2:51824938-51824632 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 38

Conread position: 9-336
Cow position: chr2:76340640-76340974 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 10-176
Cow position: chr2:76764686-76764856 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 10-282
Cow position: chr2:75600734-75600458 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 10-321
Cow position: chr2:28480107-28480408 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 36

Conread position: 11-336
Cow position: chr2:39590265-39589947 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 11-336
Cow position: chr2:39597308-39596990 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 12-248
Cow position: chr2:41145323-41145090 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 30, 8

Conread position: 12-249
Cow position: chr2:68970747-68970512 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 125, 8

Conread position: 12-281
Cow position: chr2:66403923-66404181 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 128, 8

Conread position: 12-314
Cow position: chr2:74353907-74353610 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 8

Conread position: 12-336
Cow position: chr2:66217535-66217848 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 14-303
Cow position: chr2:50777777-50777500 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 258, 8

Conread position: 15-263
Cow position: chr2:69770512-69770268 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 169, 0

Conread position: 15-291
Cow position: chr2:41954893-41954616 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 15-295
Cow position: chr2:66614901-66615189 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 16-288
Cow position: chr2:46262447-46262184 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 20-263
Cow position: chr2:41088110-41088364 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 40

Conread position: 21-295
Cow position: chr2:6160335-6160606 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 178, 11

Conread position: 21-300
Cow position: chr2:46244017-46244298 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 21-315
Cow position: chr2:80116100-80115821 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 26, 0

Conread position: 21-336
Cow position: chr2:29041884-29041578 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 28

Conread position: 21-336
Cow position: chr2:36007585-36007881 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 21-337
Cow position: chr2:72527961-72527646 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 32

Conread position: 22-261
Cow position: chr2:81348883-81349118 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 22-262
Cow position: chr2:85926058-85925826 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 22-278
Cow position: chr2:24393689-24393939 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 22-328
Cow position: chr2:73094787-73095082 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 36

Conread position: 22-336
Cow position: chr2:56102461-56102774 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 23-185
Cow position: chr2:45537436-45537596 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 24

Conread position: 23-336
Cow position: chr2:60471189-60470874 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 143

Conread position: 23-336
Cow position: chr2:85091034-85091344 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 24

Conread position: 25-335
Cow position: chr2:71922226-71921921 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 22

Conread position: 25-336
Cow position: chr2:30141382-30141071 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 26-176
Cow position: chr2:66563235-66563385 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 21

Conread position: 26-218
Cow position: chr2:26851161-26850972 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 147

Conread position: 26-218
Cow position: chr2:76122463-76122654 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 110, 33

Conread position: 26-234
Cow position: chr2:73637176-73637383 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 27

Conread position: 26-273
Cow position: chr2:44550845-44551079 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 111, 33

Conread position: 26-291
Cow position: chr2:1756037-1755774 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 156

Conread position: 26-295
Cow position: chr2:16422551-16422287 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 26-295
Cow position: chr2:45311121-45311394 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 26-319
Cow position: chr2:21355853-21356143 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 26-335
Cow position: chr2:69676535-69676842 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 21

Conread position: 26-336
Cow position: chr2:6039009-6038699 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 140

Conread position: 26-336
Cow position: chr2:39078374-39078069 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 19

Conread position: 26-336
Cow position: chr2:46184269-46184582 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 26-336
Cow position: chr2:69223224-69223537 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 21

Conread position: 27-336
Cow position: chr2:6884220-6883919 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 28-286
Cow position: chr2:32408499-32408733 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 19

Conread position: 28-336
Cow position: chr2:1210769-1211076 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 31-279
Cow position: chr2:67432094-67432342 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 182

Conread position: 31-322
Cow position: chr2:8723733-8724017 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 111, 38

Conread position: 31-336
Cow position: chr2:31488745-31488449 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 111, 18

Conread position: 31-336
Cow position: chr2:58025300-58025005 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 124

Conread position: 31-336
Cow position: chr2:74236297-74236607 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 110, 25

Conread position: 31-337
Cow position: chr2:43596182-43596479 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 32-294
Cow position: chr2:10867902-10868159 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 7, 108

Conread position: 32-295
Cow position: chr2:2689161-2688904 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 6

Conread position: 32-333
Cow position: chr2:48069408-48069704 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 32-336
Cow position: chr2:1364892-1365202 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 38

Conread position: 33-334
Cow position: chr2:31457479-31457187 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 117

Conread position: 34-321
Cow position: chr2:46230766-46231059 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 281

Conread position: 35-336
Cow position: chr2:10469385-10469081 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 21, 11

Conread position: 37-336
Cow position: chr2:46202255-46201964 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 38-225
Cow position: chr2:68239219-68239044 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 12

Conread position: 39-282
Cow position: chr2:46200275-46200522 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 14

Conread position: 39-295
Cow position: chr2:47138828-47138570 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 40-336
Cow position: chr2:48617967-48617670 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 41-329
Cow position: chr2:42599915-42599624 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 42-183
Cow position: chr2:58686916-58686778 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 42-218
Cow position: chr2:73360121-73360301 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 42-282
Cow position: chr2:46909456-46909697 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 30, 5

Conread position: 42-292
Cow position: chr2:6282031-6282275 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 33

Conread position: 42-307
Cow position: chr2:53430709-53430452 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 17

Conread position: 42-331
Cow position: chr2:28303309-28303019 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 29, 19

Conread position: 42-334
Cow position: chr2:73282574-73282867 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 107, 170

Conread position: 42-336
Cow position: chr2:2673507-2673217 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 42-336
Cow position: chr2:24271218-24270916 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 166

Conread position: 42-336
Cow position: chr2:45575013-45575304 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 56

Conread position: 42-336
Cow position: chr2:51638540-51638238 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 157

Conread position: 42-336
Cow position: chr2:57776337-57776041 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 133

Conread position: 43-294
Cow position: chr2:28318873-28319108 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 10

Conread position: 43-336
Cow position: chr2:33497216-33497512 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 43-336
Cow position: chr2:80892325-80892615 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 26

Conread position: 44-335
Cow position: chr2:15335008-15335297 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 23, 137

Conread position: 45-282
Cow position: chr2:68190658-68190890 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 128

Conread position: 45-335
Cow position: chr2:24435045-24435329 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 45-336
Cow position: chr2:40691470-40691179 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 125

Conread position: 47-286
Cow position: chr2:76110373-76110137 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 96, 10

Conread position: 48-285
Cow position: chr2:77082786-77083027 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 48-295
Cow position: chr2:85246351-85246599 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 18, 133

Conread position: 48-336
Cow position: chr2:893726-894012 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 129

Conread position: 48-336
Cow position: chr2:47066601-47066888 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 48-336
Cow position: chr2:57509380-57509110 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 23, 8

Conread position: 49-226
Cow position: chr2:9324969-9324795 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 10

Conread position: 49-269
Cow position: chr2:50400403-50400178 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 133

Conread position: 49-279
Cow position: chr2:73353770-73353537 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 123

Conread position: 49-285
Cow position: chr2:355340-355581 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 49-291
Cow position: chr2:11900406-11900167 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 65

Conread position: 49-309
Cow position: chr2:42608043-42607790 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 139

Conread position: 49-327
Cow position: chr2:45554290-45554016 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 235, 129

Conread position: 49-336
Cow position: chr2:18858168-18858444 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 13, 79

Conread position: 49-336
Cow position: chr2:21416282-21416006 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 49-336
Cow position: chr2:27076690-27076401 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 20, 80

Conread position: 50-252
Cow position: chr2:60462844-60463040 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 121

Conread position: 50-252
Cow position: chr2:60468223-60468419 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 121

Conread position: 50-282
Cow position: chr2:80797643-80797421 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 0

Conread position: 50-307
Cow position: chr2:68084485-68084235 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 7

Conread position: 50-319
Cow position: chr2:41185447-41185180 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 21, 40

Conread position: 50-328
Cow position: chr2:82647847-82648104 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 21, 8

Conread position: 50-335
Cow position: chr2:45623992-45623719 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 130

Conread position: 50-335
Cow position: chr2:63865354-63865638 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 9

Conread position: 50-336
Cow position: chr2:24540575-24540284 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 50-336
Cow position: chr2:52385942-52386230 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 122

Conread position: 51-214
Cow position: chr2:33241438-33241605 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 51-277
Cow position: chr2:24225851-24226075 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 119

Conread position: 51-334
Cow position: chr2:76969203-76969484 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 51-336
Cow position: chr2:305874-306154 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 128

Conread position: 51-336
Cow position: chr2:27600570-27600853 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 51-336
Cow position: chr2:30112989-30112707 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 98

Conread position: 52-282
Cow position: chr2:47990406-47990186 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 92, 7

Conread position: 52-336
Cow position: chr2:39941462-39941185 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 64

Conread position: 52-336
Cow position: chr2:46294066-46294342 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 53-281
Cow position: chr2:85930430-85930204 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 37

Conread position: 53-335
Cow position: chr2:13342008-13342287 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 53-336
Cow position: chr2:62272958-62273238 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 53-337
Cow position: chr2:24709369-24709652 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 51

Conread position: 54-223
Cow position: chr2:46353522-46353690 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 126

Conread position: 55-269
Cow position: chr2:56037123-56036908 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 165

Conread position: 55-294
Cow position: chr2:103551-103788 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 125

Conread position: 55-295
Cow position: chr2:38882450-38882682 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 124

Conread position: 55-336
Cow position: chr2:33318194-33318469 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 8, 144

Conread position: 55-336
Cow position: chr2:65024260-65023988 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 12, 109

Conread position: 55-336
Cow position: chr2:67417032-67417314 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 55-336
Cow position: chr2:72993105-72993390 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 12, 124

Conread position: 55-336
Cow position: chr2:82526843-82527123 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 87, 123

Conread position: 56-282
Cow position: chr2:6912676-6912450 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 86, 72

Conread position: 56-336
Cow position: chr2:43773606-43773883 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 65

Conread position: 56-336
Cow position: chr2:45259114-45259384 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 57-274
Cow position: chr2:46194765-46194549 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 12, 130

Conread position: 57-288
Cow position: chr2:16071424-16071656 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 57-295
Cow position: chr2:64830816-64830588 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 81, 61

Conread position: 57-330
Cow position: chr2:77860044-77859780 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 109

Conread position: 57-336
Cow position: chr2:70640887-70641168 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 68

Conread position: 57-336
Cow position: chr2:78744670-78744393 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 57-336
Cow position: chr2:83887660-83887377 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 57-348
Cow position: chr2:41949996-41949699 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 143

Conread position: 58-336
Cow position: chr2:35980718-35980998 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 59-307
Cow position: chr2:71163749-71163993 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 225, 24

Conread position: 59-329
Cow position: chr2:4070884-4070626 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 190

Conread position: 59-331
Cow position: chr2:69250704-69250981 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 133

Conread position: 59-336
Cow position: chr2:8505782-8505509 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 59-336
Cow position: chr2:36077318-36077040 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 119

Conread position: 60-332
Cow position: chr2:69581541-69581812 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 213

Conread position: 61-274
Cow position: chr2:14396279-14396485 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 75

Conread position: 61-336
Cow position: chr2:84997285-84997008 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 242

Conread position: 62-294
Cow position: chr2:39068268-39068043 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 111, 123

Conread position: 63-280
Cow position: chr2:36630934-36630717 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 75, 120

Conread position: 64-336
Cow position: chr2:208341-208616 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 68-336
Cow position: chr2:16693111-16692849 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 50

Conread position: 69-276
Cow position: chr2:46359089-46359297 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 102

Conread position: 69-286
Cow position: chr2:32489455-32489657 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 69-342
Cow position: chr2:60956326-60956067 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 270, 12

Conread position: 70-310
Cow position: chr2:76182860-76183086 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 11

Conread position: 70-335
Cow position: chr2:38658828-38659086 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 88, 58

Conread position: 70-336
Cow position: chr2:32406635-32406366 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 223, 54

Conread position: 71-313
Cow position: chr2:485571-485337 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 10

Conread position: 71-335
Cow position: chr2:22506907-22507172 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 72-313
Cow position: chr2:33972396-33972150 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 72-335
Cow position: chr2:51920841-51921105 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 72-337
Cow position: chr2:31505898-31506167 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 70, 56

Conread position: 73-220
Cow position: chr2:47152582-47152731 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 76-294
Cow position: chr2:34492383-34492178 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 76-332
Cow position: chr2:46181820-46182074 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 196

Conread position: 76-336
Cow position: chr2:55387497-55387241 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 65

Conread position: 76-336
Cow position: chr2:70674675-70674429 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 90

Conread position: 78-331
Cow position: chr2:29716881-29717150 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 59, 0

Conread position: 78-336
Cow position: chr2:14884230-14883975 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 108

Conread position: 81-273
Cow position: chr2:40882020-40881841 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 81-328
Cow position: chr2:4922181-4922421 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 83-278
Cow position: chr2:1203626-1203430 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 89-280
Cow position: chr2:40836224-40836415 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 38

Conread position: 92-336
Cow position: chr2:1095831-1095598 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 105, 0

Conread position: 94-252
Cow position: chr2:6232543-6232392 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 65

Conread position: 96-333
Cow position: chr2:28711063-28711282 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.