Cow genome map

Conread name: Tra1-TCH01A060005

Conread position: 1-163
Cow position: chr21:16569985-16569825 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 1-163
Cow position: chr21:44214211-44214048 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 46

Conread position: 1-164
Cow position: chr21:45262726-45262889 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 89

Conread position: 1-171
Cow position: chr21:4280588-4280756 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 40

Conread position: 1-189
Cow position: chr21:8206856-8206670 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 24

Conread position: 1-198
Cow position: chr21:35354615-35354422 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 57, 24

Conread position: 1-206
Cow position: chr21:25628826-25629027 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 132, 64

Conread position: 1-210
Cow position: chr21:18155484-18155693 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 19

Conread position: 1-214
Cow position: chr21:30222429-30222218 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 107, 0

Conread position: 1-220
Cow position: chr21:4722641-4722427 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 50

Conread position: 1-226
Cow position: chr21:29978676-29978898 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 46

Conread position: 1-227
Cow position: chr21:17856628-17856407 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 126, 0

Conread position: 1-227
Cow position: chr21:20260235-20260457 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 191, 0

Conread position: 1-229
Cow position: chr21:957757-957529 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 132, 58

Conread position: 1-229
Cow position: chr21:5384903-5384678 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 48

Conread position: 1-230
Cow position: chr21:19411931-19412158 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 141, 59

Conread position: 1-237
Cow position: chr21:11360120-11359891 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 46

Conread position: 1-243
Cow position: chr21:11456726-11456962 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 100, 18

Conread position: 1-273
Cow position: chr21:13488611-13488337 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 1-274
Cow position: chr21:46144043-46143760 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 141, 46

Conread position: 1-278
Cow position: chr21:18844928-18845202 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 57

Conread position: 1-279
Cow position: chr21:6102177-6102457 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 46

Conread position: 1-281
Cow position: chr21:13365427-13365151 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 70, 179

Conread position: 1-282
Cow position: chr21:10118643-10118362 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 27

Conread position: 1-282
Cow position: chr21:32559281-32559545 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 1-282
Cow position: chr21:33727379-33727652 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 70

Conread position: 1-286
Cow position: chr21:42135532-42135819 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-288
Cow position: chr21:46166916-46166631 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 48

Conread position: 1-294
Cow position: chr21:12801665-12801947 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 1-294
Cow position: chr21:18850142-18850421 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 69, 46

Conread position: 1-294
Cow position: chr21:41579840-41579548 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 59, 82

Conread position: 1-295
Cow position: chr21:3818293-3818012 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 35

Conread position: 1-295
Cow position: chr21:12960813-12961103 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 47

Conread position: 1-295
Cow position: chr21:22861086-22860798 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 46

Conread position: 1-295
Cow position: chr21:23586966-23586670 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 1-295
Cow position: chr21:29485066-29484780 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 1-295
Cow position: chr21:40134241-40133951 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 46

Conread position: 1-315
Cow position: chr21:28626325-28626017 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 1-326
Cow position: chr21:3236610-3236297 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 129

Conread position: 1-326
Cow position: chr21:41878555-41878241 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 70, 46

Conread position: 1-332
Cow position: chr21:40107901-40108230 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 141, 49

Conread position: 1-334
Cow position: chr21:5392452-5392781 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 43

Conread position: 1-335
Cow position: chr21:11644882-11645229 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 1-335
Cow position: chr21:20160760-20160440 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 1-335
Cow position: chr21:20262251-20262578 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 24

Conread position: 1-335
Cow position: chr21:44515348-44515021 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 46

Conread position: 1-336
Cow position: chr21:395952-395633 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr21:724800-725135 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 41

Conread position: 1-336
Cow position: chr21:4399887-4399555 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 1-336
Cow position: chr21:8985636-8985304 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 1-336
Cow position: chr21:9416334-9415997 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 1-336
Cow position: chr21:11740035-11740377 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 121

Conread position: 1-336
Cow position: chr21:13898272-13897948 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 179

Conread position: 1-336
Cow position: chr21:16187723-16188040 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 46

Conread position: 1-336
Cow position: chr21:16612709-16612384 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr21:19363375-19363695 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 169

Conread position: 1-336
Cow position: chr21:20925421-20925751 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 1-336
Cow position: chr21:23192428-23192763 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-336
Cow position: chr21:27229707-27230037 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 46

Conread position: 1-336
Cow position: chr21:30250117-30250453 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 46

Conread position: 1-336
Cow position: chr21:30607003-30607348 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 43

Conread position: 1-336
Cow position: chr21:30965525-30965857 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 1-336
Cow position: chr21:34075055-34074722 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 47

Conread position: 1-336
Cow position: chr21:34654157-34653839 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 1-336
Cow position: chr21:36162875-36163208 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 46

Conread position: 1-336
Cow position: chr21:37480039-37479714 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 49

Conread position: 1-336
Cow position: chr21:38121185-38120858 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 94

Conread position: 1-336
Cow position: chr21:39821724-39822055 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 24

Conread position: 1-336
Cow position: chr21:41974290-41974624 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-337
Cow position: chr21:46264254-46263931 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 2-163
Cow position: chr21:33359950-33360110 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 46

Conread position: 2-179
Cow position: chr21:30835450-30835270 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 2-195
Cow position: chr21:18041764-18041956 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 2-229
Cow position: chr21:20192980-20192766 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 2-246
Cow position: chr21:10633554-10633796 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 185

Conread position: 2-265
Cow position: chr21:28989693-28989438 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 60, 51

Conread position: 2-285
Cow position: chr21:1591637-1591357 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 163, 206

Conread position: 2-286
Cow position: chr21:21077409-21077134 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 45

Conread position: 2-292
Cow position: chr21:28443291-28443580 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 15

Conread position: 2-314
Cow position: chr21:46849044-46849346 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 135, 43

Conread position: 2-334
Cow position: chr21:5898318-5898638 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 2-336
Cow position: chr21:2679640-2679314 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 55

Conread position: 2-336
Cow position: chr21:24858398-24858066 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 2-336
Cow position: chr21:47802176-47802507 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 79

Conread position: 3-145
Cow position: chr21:12339723-12339581 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 42

Conread position: 3-146
Cow position: chr21:297836-297694 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 3-235
Cow position: chr21:20418600-20418833 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 54

Conread position: 3-249
Cow position: chr21:41590483-41590715 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 3-272
Cow position: chr21:39450079-39450349 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 42

Conread position: 3-307
Cow position: chr21:31662549-31662244 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 22

Conread position: 3-334
Cow position: chr21:36795685-36795357 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 172

Conread position: 3-336
Cow position: chr21:641669-641339 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 53

Conread position: 3-336
Cow position: chr21:7673205-7672888 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 107

Conread position: 3-336
Cow position: chr21:10514888-10514567 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 148, 0

Conread position: 3-336
Cow position: chr21:22856301-22855974 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 17

Conread position: 3-336
Cow position: chr21:33997145-33997471 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 68, 54

Conread position: 3-336
Cow position: chr21:37299544-37299220 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 88

Conread position: 3-336
Cow position: chr21:46037154-46037481 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 119, 46

Conread position: 4-336
Cow position: chr21:33235882-33235553 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 6

Conread position: 5-245
Cow position: chr21:6909802-6910038 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 137, 35

Conread position: 6-213
Cow position: chr21:22784034-22783829 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 43

Conread position: 6-229
Cow position: chr21:48234087-48234297 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 7-276
Cow position: chr21:9990588-9990329 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 7-287
Cow position: chr21:38449367-38449648 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 40

Conread position: 7-289
Cow position: chr21:30150185-30150467 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 101, 109

Conread position: 7-336
Cow position: chr21:10854674-10854341 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 18

Conread position: 8-194
Cow position: chr21:18554732-18554916 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 42

Conread position: 8-243
Cow position: chr21:32830675-32830443 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 44

Conread position: 8-336
Cow position: chr21:45841590-45841918 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 134, 44

Conread position: 9-249
Cow position: chr21:32454979-32454743 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 11

Conread position: 9-336
Cow position: chr21:7564239-7564567 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 9-336
Cow position: chr21:33729504-33729188 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 11-336
Cow position: chr21:31691559-31691236 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 11-336
Cow position: chr21:33263918-33263606 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 76

Conread position: 12-249
Cow position: chr21:13840398-13840164 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 58, 8

Conread position: 12-335
Cow position: chr21:40786749-40786426 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 8

Conread position: 12-336
Cow position: chr21:13048122-13048441 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 8

Conread position: 12-336
Cow position: chr21:27743822-27743496 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 161

Conread position: 12-336
Cow position: chr21:42384581-42384263 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 35

Conread position: 13-236
Cow position: chr21:44962865-44962649 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 7

Conread position: 14-319
Cow position: chr21:4189912-4189606 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 175

Conread position: 15-335
Cow position: chr21:28733842-28734156 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 16-336
Cow position: chr21:10882511-10882181 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 20-230
Cow position: chr21:41209278-41209488 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 21

Conread position: 21-336
Cow position: chr21:6764636-6764947 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 26

Conread position: 21-342
Cow position: chr21:5238451-5238154 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 316, 40

Conread position: 21-758
Cow position: chr21:41621189-41620451 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 177, 26

Conread position: 22-209
Cow position: chr21:18415117-18414932 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 34

Conread position: 23-336
Cow position: chr21:5344729-5344416 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 138

Conread position: 25-295
Cow position: chr21:1059140-1058873 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 22

Conread position: 25-323
Cow position: chr21:27124061-27124360 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 96

Conread position: 26-218
Cow position: chr21:20153015-20152820 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 36, 21

Conread position: 26-237
Cow position: chr21:36789854-36789644 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 21

Conread position: 26-266
Cow position: chr21:41198340-41198586 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 26-267
Cow position: chr21:41454889-41455126 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 27

Conread position: 26-282
Cow position: chr21:45850650-45850901 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 20, 107

Conread position: 26-331
Cow position: chr21:40899398-40899096 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 30

Conread position: 26-333
Cow position: chr21:45866993-45866694 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 20

Conread position: 26-336
Cow position: chr21:21216082-21216386 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 35

Conread position: 26-336
Cow position: chr21:43240924-43240614 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 23

Conread position: 26-336
Cow position: chr21:46912605-46912299 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 158

Conread position: 27-279
Cow position: chr21:40589426-40589671 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 20

Conread position: 27-336
Cow position: chr21:15867371-15867070 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 168

Conread position: 28-292
Cow position: chr21:27521275-27521526 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 19

Conread position: 30-336
Cow position: chr21:12617195-12616897 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 88

Conread position: 31-336
Cow position: chr21:394073-393776 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 34-229
Cow position: chr21:11250933-11250727 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 18

Conread position: 34-264
Cow position: chr21:10608400-10608629 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 22

Conread position: 34-336
Cow position: chr21:23499772-23500066 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 7, 13

Conread position: 35-226
Cow position: chr21:12454394-12454207 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 12

Conread position: 35-282
Cow position: chr21:19174763-19174512 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 11

Conread position: 35-336
Cow position: chr21:27607303-27607608 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 36-292
Cow position: chr21:3381033-3381282 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 106, 23

Conread position: 36-332
Cow position: chr21:4428737-4428447 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 29, 120

Conread position: 37-335
Cow position: chr21:42024170-42023891 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 37-336
Cow position: chr21:41957127-41957419 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 38-336
Cow position: chr21:18783636-18783928 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 39-336
Cow position: chr21:34301966-34301661 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 10

Conread position: 40-295
Cow position: chr21:8618327-8618070 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 143

Conread position: 40-313
Cow position: chr21:48250976-48251252 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 103

Conread position: 41-337
Cow position: chr21:6713477-6713784 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 18, 75

Conread position: 42-217
Cow position: chr21:27810454-27810278 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 42-293
Cow position: chr21:41597864-41597613 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 18

Conread position: 42-294
Cow position: chr21:24765336-24765081 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 117

Conread position: 42-295
Cow position: chr21:47215137-47215385 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 43-275
Cow position: chr21:17696820-17697045 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 43-294
Cow position: chr21:35997218-35996968 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 136

Conread position: 43-323
Cow position: chr21:23801084-23801353 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 122, 0

Conread position: 44-271
Cow position: chr21:45375665-45375436 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 132, 95

Conread position: 45-274
Cow position: chr21:17175192-17174957 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 29

Conread position: 48-334
Cow position: chr21:36793934-36793639 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 12, 139

Conread position: 49-185
Cow position: chr21:4568321-4568187 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 49-235
Cow position: chr21:7825141-7825320 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 19

Conread position: 49-259
Cow position: chr21:46860071-46860270 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 36

Conread position: 49-294
Cow position: chr21:5137447-5137693 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 34

Conread position: 49-294
Cow position: chr21:45330564-45330811 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 10

Conread position: 49-317
Cow position: chr21:1384452-1384198 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 92, 18

Conread position: 49-336
Cow position: chr21:26629141-26628852 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 50-250
Cow position: chr21:45921022-45921218 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 7

Conread position: 50-265
Cow position: chr21:40664158-40663941 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 50-268
Cow position: chr21:18790520-18790733 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 16, 140

Conread position: 50-280
Cow position: chr21:17428540-17428314 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 173

Conread position: 50-295
Cow position: chr21:22353193-22353436 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 33, 173

Conread position: 50-326
Cow position: chr21:15445035-15445314 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 125

Conread position: 50-328
Cow position: chr21:15742051-15742334 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 136

Conread position: 50-330
Cow position: chr21:48176865-48176589 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 103

Conread position: 50-336
Cow position: chr21:4281834-4282108 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 12, 26

Conread position: 50-336
Cow position: chr21:5454950-5455231 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 127

Conread position: 50-336
Cow position: chr21:17300425-17300145 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 6, 236

Conread position: 50-336
Cow position: chr21:38900813-38900528 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 7

Conread position: 50-336
Cow position: chr21:45915673-45915949 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 186, 60

Conread position: 50-343
Cow position: chr21:8234990-8235274 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 9, 186

Conread position: 51-336
Cow position: chr21:82116-81825 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 51-336
Cow position: chr21:3920174-3920457 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 60

Conread position: 51-336
Cow position: chr21:39401631-39401355 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 134

Conread position: 52-295
Cow position: chr21:37361440-37361678 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 19, 117

Conread position: 52-336
Cow position: chr21:45151586-45151876 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 7

Conread position: 53-269
Cow position: chr21:8235518-8235722 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 85

Conread position: 53-295
Cow position: chr21:2927167-2927407 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 119

Conread position: 53-317
Cow position: chr21:33755-33497 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 80, 114

Conread position: 53-335
Cow position: chr21:25127634-25127366 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 85, 8

Conread position: 53-336
Cow position: chr21:7452089-7452370 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 88, 244

Conread position: 53-336
Cow position: chr21:18495004-18494733 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 199

Conread position: 55-286
Cow position: chr21:5597182-5596951 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 6

Conread position: 55-292
Cow position: chr21:21652505-21652268 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 87, 193

Conread position: 55-298
Cow position: chr21:16503673-16503915 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 10

Conread position: 55-335
Cow position: chr21:28260033-28259753 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 109

Conread position: 55-336
Cow position: chr21:1529200-1529473 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 11

Conread position: 55-336
Cow position: chr21:1814928-1815206 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 95

Conread position: 55-336
Cow position: chr21:10967266-10966988 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 138

Conread position: 55-336
Cow position: chr21:19169873-19170155 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 234

Conread position: 55-336
Cow position: chr21:25281762-25282032 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 18, 12

Conread position: 55-336
Cow position: chr21:32192208-32191925 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 131

Conread position: 56-256
Cow position: chr21:27624740-27624547 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 142, 0

Conread position: 56-324
Cow position: chr21:42348644-42348911 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 56-332
Cow position: chr21:26835258-26835536 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 56-336
Cow position: chr21:5595688-5595419 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 47

Conread position: 57-266
Cow position: chr21:32339706-32339912 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 136

Conread position: 57-334
Cow position: chr21:7132437-7132705 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 57-335
Cow position: chr21:23322047-23322325 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 54

Conread position: 57-336
Cow position: chr21:2515203-2514929 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 137

Conread position: 57-336
Cow position: chr21:11706714-11706995 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 206

Conread position: 57-336
Cow position: chr21:12366412-12366142 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 57-336
Cow position: chr21:28512558-28512296 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 57-336
Cow position: chr21:43357228-43357506 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 131

Conread position: 58-269
Cow position: chr21:2526142-2525928 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 59-295
Cow position: chr21:24094721-24094948 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 9

Conread position: 59-335
Cow position: chr21:42190146-42190411 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 113

Conread position: 59-336
Cow position: chr21:48484418-48484685 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 12, 94

Conread position: 60-336
Cow position: chr21:33210229-33209954 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 62-226
Cow position: chr21:14515876-14515710 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 68-247
Cow position: chr21:31511305-31511137 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 70-310
Cow position: chr21:17410640-17410878 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 21

Conread position: 70-336
Cow position: chr21:23478700-23478962 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 72, 116

Conread position: 70-345
Cow position: chr21:25383031-25382744 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 67, 96

Conread position: 71-290
Cow position: chr21:9353460-9353241 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 56

Conread position: 72-335
Cow position: chr21:33831638-33831888 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 73-325
Cow position: chr21:18935773-18935528 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 75-342
Cow position: chr21:23683560-23683299 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 103

Conread position: 76-335
Cow position: chr21:5636707-5636965 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 77-322
Cow position: chr21:17723027-17722793 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 62

Conread position: 78-321
Cow position: chr21:17416752-17416992 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 61

Conread position: 81-294
Cow position: chr21:34835428-34835626 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 81-336
Cow position: chr21:38867566-38867811 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 134, 55

Conread position: 85-336
Cow position: chr21:5153632-5153372 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 106

Conread position: 89-336
Cow position: chr21:10151793-10151550 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 77

Conread position: 90-336
Cow position: chr21:25344869-25344633 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 80

Conread position: 91-290
Cow position: chr21:13163887-13163694 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 52, 61

Conread position: 96-266
Cow position: chr21:49353193-49353026 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.