Cow genome map

Conread name: Tra1-TCH01A060005

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1-142
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 46

Conread position: 1-157
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 42

Conread position: 1-160
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 56

Conread position: 1-167
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 46

Conread position: 1-171
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 1-186
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 46

Conread position: 1-210
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 77

Conread position: 1-214
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 136, 51

Conread position: 1-217
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 70, 55

Conread position: 1-218
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1-220
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 55, 46

Conread position: 1-226
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 60

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 1-261
Cow position:
Alignm length: 263
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 134

Conread position: 1-263
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 35

Conread position: 1-274
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 1-274
Cow position:
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 46

Conread position: 1-274
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 58

Conread position: 1-280
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 175, 44

Conread position: 1-290
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 19

Conread position: 1-290
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-294
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 1-294
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 1-294
Cow position:
Alignm length: 296
Alignm identity: 202
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 70, 178

Conread position: 1-300
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 137

Conread position: 1-319
Cow position:
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 46

Conread position: 1-322
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 239, 24

Conread position: 1-327
Cow position:
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 82

Conread position: 1-331
Cow position:
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 1-334
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 1-334
Cow position:
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 1-334
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 23

Conread position: 1-334
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 47

Conread position: 1-336
Cow position:
Alignm length: 338
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 62, 48

Conread position: 1-336
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 60, 0

Conread position: 1-336
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 56

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 1-336
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 70, 35

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 1-336
Cow position:
Alignm length: 338
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 46

Conread position: 1-336
Cow position:
Alignm length: 339
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 23

Conread position: 1-336
Cow position:
Alignm length: 339
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 48

Conread position: 1-336
Cow position:
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 265

Conread position: 1-336
Cow position:
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 46

Conread position: 1-336
Cow position:
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 43

Conread position: 1-336
Cow position:
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 87

Conread position: 1-336
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 48

Conread position: 1-336
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 71

Conread position: 2-229
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 154

Conread position: 2-253
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 48, 68

Conread position: 2-282
Cow position:
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 2-326
Cow position:
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 2-336
Cow position:
Alignm length: 338
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 45

Conread position: 3-334
Cow position:
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 154

Conread position: 3-336
Cow position:
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 4-253
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 4-336
Cow position:
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 18

Conread position: 5-146
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 117

Conread position: 10-219
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 157, 99

Conread position: 10-286
Cow position:
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 121

Conread position: 10-307
Cow position:
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 10

Conread position: 10-336
Cow position:
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 149

Conread position: 10-337
Cow position:
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 10-337
Cow position:
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 11-224
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 122

Conread position: 12-226
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 78

Conread position: 12-336
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 15-282
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 15-286
Cow position:
Alignm length: 273
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 32

Conread position: 15-294
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 32

Conread position: 15-300
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 15-336
Cow position:
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 16-282
Cow position:
Alignm length: 269
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 55, 31

Conread position: 21-194
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 102

Conread position: 21-336
Cow position:
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 21-336
Cow position:
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 22-298
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 49, 35

Conread position: 22-332
Cow position:
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 106

Conread position: 22-335
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 208

Conread position: 22-336
Cow position:
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 87

Conread position: 23-294
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 39

Conread position: 23-298
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 5, 145

Conread position: 24-275
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 21

Conread position: 25-322
Cow position:
Alignm length: 301
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 26-217
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 27

Conread position: 26-220
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 19

Conread position: 26-244
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 124, 0

Conread position: 26-288
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 112, 27

Conread position: 26-295
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 26

Conread position: 26-310
Cow position:
Alignm length: 286
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 21

Conread position: 26-334
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 26-334
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 19

Conread position: 26-335
Cow position:
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 78

Conread position: 26-336
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 27

Conread position: 26-336
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 26-336
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 27-278
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 23

Conread position: 28-220
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 168, 20

Conread position: 30-334
Cow position:
Alignm length: 307
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 113

Conread position: 31-336
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 106

Conread position: 32-309
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 29, 13

Conread position: 32-336
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 80, 161

Conread position: 33-331
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 126

Conread position: 33-336
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 13

Conread position: 35-325
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 116, 24

Conread position: 38-316
Cow position:
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 29

Conread position: 41-289
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 42-282
Cow position:
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 218

Conread position: 43-278
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 73, 25

Conread position: 48-334
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 11

Conread position: 48-336
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 241

Conread position: 49-210
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 123

Conread position: 49-336
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 74

Conread position: 50-218
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 50-274
Cow position:
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 50-282
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 6, 149

Conread position: 50-334
Cow position:
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 9

Conread position: 50-334
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 61, 142

Conread position: 50-336
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 0

Conread position: 51-179
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 105

Conread position: 51-282
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 118

Conread position: 51-331
Cow position:
Alignm length: 282
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 105

Conread position: 53-277
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 96, 0

Conread position: 55-210
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 63

Conread position: 55-336
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 73

Conread position: 56-288
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 56-291
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 81, 62

Conread position: 57-210
Cow position:
Alignm length: 154
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 57-263
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 59

Conread position: 57-336
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 57-336
Cow position:
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 20

Conread position: 60-336
Cow position:
Alignm length: 280
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 61-259
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 17

Conread position: 61-336
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 47

Conread position: 69-336
Cow position:
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 221, 57

Conread position: 70-322
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 69

Conread position: 72-332
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 81-277
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 81-295
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 58

Conread position: 81-336
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 61, 82

Conread position: 83-334
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 75

Conread position: 87-294
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 87-321
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 52

Conread position: 92-295
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 138, 92

Conread position: 687-880
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 42

Show alignments to all cow chromosomes.