Cow genome map
| Conread name: | Tra1-TCH01A060005 |
| Conread position: | 1-161 |
| Cow position: | chr27:23510923-23511084 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-181 |
| Cow position: | chr27:16625833-16626011 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-203 |
| Cow position: | chr27:16103743-16103936 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-227 |
| Cow position: | chr27:23890874-23891094 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 70, 46 |
| Conread position: | 1-229 |
| Cow position: | chr27:16780802-16781023 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 1-230 |
| Cow position: | chr27:15633514-15633741 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 141, 49 |
| Conread position: | 1-242 |
| Cow position: | chr27:15409100-15408872 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1-248 |
| Cow position: | chr27:3306710-3306951 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 1-263 |
| Cow position: | chr27:16705187-16705439 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 1-273 |
| Cow position: | chr27:28061825-28061560 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 261, 67 |
| Conread position: | 1-276 |
| Cow position: | chr27:19685777-19685509 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 1-279 |
| Cow position: | chr27:29283472-29283203 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 137, 58 |
| Conread position: | 1-280 |
| Cow position: | chr27:26238961-26239233 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 1-294 |
| Cow position: | chr27:19660868-19661166 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 1-295 |
| Cow position: | chr27:27259550-27259834 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 139, 47 |
| Conread position: | 1-305 |
| Cow position: | chr27:26643621-26643907 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-313 |
| Cow position: | chr27:10979799-10980106 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 1-313 |
| Cow position: | chr27:16284411-16284715 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 61 |
| Conread position: | 1-313 |
| Cow position: | chr27:27389085-27388786 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 1-319 |
| Cow position: | chr27:25379925-25380239 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 169 |
| Conread position: | 1-329 |
| Cow position: | chr27:435170-435502 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 1-331 |
| Cow position: | chr27:22035441-22035113 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-334 |
| Cow position: | chr27:14670446-14670119 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 1-335 |
| Cow position: | chr27:14298426-14298096 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 40 |
| Conread position: | 1-335 |
| Cow position: | chr27:27449498-27449173 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 1-336 |
| Cow position: | chr27:1122967-1123283 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-336 |
| Cow position: | chr27:1353519-1353860 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 59, 160 |
| Conread position: | 1-336 |
| Cow position: | chr27:8962321-8962004 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 1-336 |
| Cow position: | chr27:15100878-15100545 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 48 |
| Conread position: | 1-336 |
| Cow position: | chr27:15454144-15454478 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 93 |
| Conread position: | 1-336 |
| Cow position: | chr27:19387954-19388282 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 47 |
| Conread position: | 1-336 |
| Cow position: | chr27:22171233-22171564 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 192 |
| Conread position: | 1-336 |
| Cow position: | chr27:24446221-24445891 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-336 |
| Cow position: | chr27:26424650-26424324 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 25 |
| Conread position: | 1-336 |
| Cow position: | chr27:26787427-26787099 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 58 |
| Conread position: | 1-336 |
| Cow position: | chr27:28206735-28207063 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-336 |
| Cow position: | chr27:31373047-31372715 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 130 |
| Conread position: | 1-354 |
| Cow position: | chr27:815299-815647 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 2-153 |
| Cow position: | chr27:15378542-15378392 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 2-210 |
| Cow position: | chr27:17331433-17331642 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-241 |
| Cow position: | chr27:20497872-20498110 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 140, 48 |
| Conread position: | 2-285 |
| Cow position: | chr27:16478405-16478135 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 63, 126 |
| Conread position: | 2-290 |
| Cow position: | chr27:706887-707166 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-313 |
| Cow position: | chr27:22220491-22220796 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 2-332 |
| Cow position: | chr27:31219193-31219501 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 6, 25 |
| Conread position: | 2-336 |
| Cow position: | chr27:17397517-17397190 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 255 |
| Conread position: | 2-336 |
| Cow position: | chr27:26428195-26427863 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 55 |
| Conread position: | 3-210 |
| Cow position: | chr27:20789441-20789240 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 92 |
| Conread position: | 3-321 |
| Cow position: | chr27:24014801-24014491 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 3-332 |
| Cow position: | chr27:11273515-11273828 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 139, 48 |
| Conread position: | 3-336 |
| Cow position: | chr27:20641397-20641078 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 88 |
| Conread position: | 3-336 |
| Cow position: | chr27:25411583-25411250 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 3-336 |
| Cow position: | chr27:30407098-30406766 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 4-278 |
| Cow position: | chr27:1498254-1498521 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 4-332 |
| Cow position: | chr27:4672955-4673276 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 174 |
| Conread position: | 4-336 |
| Cow position: | chr27:21669178-21668860 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 4-342 |
| Cow position: | chr27:20283583-20283895 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 5-175 |
| Cow position: | chr27:30804280-30804448 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 5-307 |
| Cow position: | chr27:30890231-30890522 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-321 |
| Cow position: | chr27:23472196-23472506 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 42 |
| Conread position: | 6-282 |
| Cow position: | chr27:16871975-16871708 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 7-176 |
| Cow position: | chr27:27694830-27694663 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 7-307 |
| Cow position: | chr27:26441121-26440822 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 9-336 |
| Cow position: | chr27:1189871-1189548 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 11-236 |
| Cow position: | chr27:154309-154533 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 11-296 |
| Cow position: | chr27:24321132-24321413 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 11-336 |
| Cow position: | chr27:7212767-7212457 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 12-336 |
| Cow position: | chr27:22426883-22426565 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 8 |
| Conread position: | 14-126 |
| Cow position: | chr27:24306775-24306887 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 15-239 |
| Cow position: | chr27:22268451-22268673 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 15-335 |
| Cow position: | chr27:27038891-27038576 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 15-336 |
| Cow position: | chr27:25790754-25791077 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 20-335 |
| Cow position: | chr27:15859134-15858827 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 21-263 |
| Cow position: | chr27:18739333-18739580 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 180 |
| Conread position: | 21-291 |
| Cow position: | chr27:27040558-27040829 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 21-336 |
| Cow position: | chr27:21351066-21350750 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 21-336 |
| Cow position: | chr27:23576582-23576274 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 241, 27 |
| Conread position: | 22-335 |
| Cow position: | chr27:19589432-19589739 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 23-236 |
| Cow position: | chr27:26426165-26426374 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 23-289 |
| Cow position: | chr27:12246618-12246877 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 23-336 |
| Cow position: | chr27:16237866-16238161 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 25-336 |
| Cow position: | chr27:17472768-17473088 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 26-171 |
| Cow position: | chr27:22386829-22386974 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 26-260 |
| Cow position: | chr27:30670701-30670927 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 26-261 |
| Cow position: | chr27:30988758-30988989 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 26-288 |
| Cow position: | chr27:18558318-18558581 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 105, 127 |
| Conread position: | 26-292 |
| Cow position: | chr27:2592504-2592762 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 26, 146 |
| Conread position: | 26-295 |
| Cow position: | chr27:28001851-28001599 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 26-307 |
| Cow position: | chr27:6500022-6500301 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 21 |
| Conread position: | 26-324 |
| Cow position: | chr27:26398297-26398006 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 26-330 |
| Cow position: | chr27:24331681-24331988 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 27-336 |
| Cow position: | chr27:22418808-22418502 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 27-336 |
| Cow position: | chr27:27020144-27019838 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 30-282 |
| Cow position: | chr27:28164438-28164200 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 31-330 |
| Cow position: | chr27:23455193-23454891 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 232 |
| Conread position: | 33-261 |
| Cow position: | chr27:20591947-20592174 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 35-336 |
| Cow position: | chr27:4983641-4983336 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 35-336 |
| Cow position: | chr27:15032684-15032986 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 36-300 |
| Cow position: | chr27:27641037-27640760 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 234 |
| Conread position: | 37-336 |
| Cow position: | chr27:28984971-28984676 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 104, 35 |
| Conread position: | 38-335 |
| Cow position: | chr27:30744853-30744557 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 38-336 |
| Cow position: | chr27:26959643-26959358 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 39-268 |
| Cow position: | chr27:6037098-6037319 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 39-294 |
| Cow position: | chr27:27632632-27632386 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 41-336 |
| Cow position: | chr27:22330697-22330395 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 42-195 |
| Cow position: | chr27:22569750-22569898 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 42-274 |
| Cow position: | chr27:20354557-20354783 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 128 |
| Conread position: | 42-294 |
| Cow position: | chr27:12596738-12596980 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 138 |
| Conread position: | 42-336 |
| Cow position: | chr27:9090833-9090536 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 43-331 |
| Cow position: | chr27:8430462-8430167 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 161, 74 |
| Conread position: | 45-335 |
| Cow position: | chr27:2957381-2957668 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 47-194 |
| Cow position: | chr27:10395280-10395134 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 124 |
| Conread position: | 47-336 |
| Cow position: | chr27:8062373-8062097 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 48-185 |
| Cow position: | chr27:4011656-4011797 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 49-236 |
| Cow position: | chr27:18434488-18434305 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 49-253 |
| Cow position: | chr27:27550760-27550565 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 49-279 |
| Cow position: | chr27:14435521-14435753 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 7, 213 |
| Conread position: | 50-229 |
| Cow position: | chr27:31395115-31395298 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 50-243 |
| Cow position: | chr27:24357239-24357438 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 50-264 |
| Cow position: | chr27:18195345-18195561 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 50-294 |
| Cow position: | chr27:19577657-19577897 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 50-336 |
| Cow position: | chr27:12429386-12429677 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 50-336 |
| Cow position: | chr27:26807581-26807301 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 52-277 |
| Cow position: | chr27:19647954-19647738 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 53-208 |
| Cow position: | chr27:18948611-18948453 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 53-256 |
| Cow position: | chr27:13251992-13252195 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 53-280 |
| Cow position: | chr27:22454794-22454570 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 9, 128 |
| Conread position: | 53-332 |
| Cow position: | chr27:31231101-31230834 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 53-336 |
| Cow position: | chr27:28276266-28276535 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 54-336 |
| Cow position: | chr27:30560901-30561181 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 229, 56 |
| Conread position: | 55-328 |
| Cow position: | chr27:28907050-28907325 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 55-331 |
| Cow position: | chr27:19931138-19931413 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 12, 141 |
| Conread position: | 55-335 |
| Cow position: | chr27:23015840-23016120 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 8, 129 |
| Conread position: | 55-336 |
| Cow position: | chr27:17763410-17763686 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 9, 137 |
| Conread position: | 56-334 |
| Cow position: | chr27:15315494-15315752 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 56-336 |
| Cow position: | chr27:1903046-1903328 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 57-165 |
| Cow position: | chr27:20481386-20481279 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 64, 38 |
| Conread position: | 57-213 |
| Cow position: | chr27:16589723-16589570 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 57-335 |
| Cow position: | chr27:11081183-11081463 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 57-336 |
| Cow position: | chr27:12097579-12097860 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 59-295 |
| Cow position: | chr27:22498548-22498779 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 59-298 |
| Cow position: | chr27:23554339-23554096 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 5, 219 |
| Conread position: | 60-274 |
| Cow position: | chr27:27055567-27055781 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-264 |
| Cow position: | chr27:22547413-22547211 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-336 |
| Cow position: | chr27:19717920-19718181 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 69-289 |
| Cow position: | chr27:22771753-22771976 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 69-334 |
| Cow position: | chr27:24559443-24559188 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 11 |
| Conread position: | 69-336 |
| Cow position: | chr27:16619990-16620253 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 70-326 |
| Cow position: | chr27:4664484-4664727 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 214, 38 |
| Conread position: | 70-336 |
| Cow position: | chr27:8629870-8629609 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 70-336 |
| Cow position: | chr27:13875734-13875993 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 72-243 |
| Cow position: | chr27:6052100-6052272 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 72-336 |
| Cow position: | chr27:2298412-2298677 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 169 |
| Conread position: | 74-362 |
| Cow position: | chr27:30703069-30702796 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 76-336 |
| Cow position: | chr27:12240307-12240051 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 76-336 |
| Cow position: | chr27:23632605-23632862 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 78-336 |
| Cow position: | chr27:28018344-28018599 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 82-306 |
| Cow position: | chr27:25783619-25783837 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 83-336 |
| Cow position: | chr27:29399831-29400081 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 86-293 |
| Cow position: | chr27:22179775-22179575 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 86-336 |
| Cow position: | chr27:24477432-24477665 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 89-336 |
| Cow position: | chr27:29831668-29831423 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 90-295 |
| Cow position: | chr27:6058520-6058726 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 96-286 |
| Cow position: | chr27:21453049-21452855 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 41, 160 |
Show alignments to all cow chromosomes.