Cow genome map

Conread name: Tra1-TCH01A060005

Conread position: 1-146
Cow position: chr7:35300356-35300500 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-147
Cow position: chr7:60870010-60869866 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 46

Conread position: 1-158
Cow position: chr7:39472452-39472610 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 1-167
Cow position: chr7:58350893-58351064 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 1-175
Cow position: chr7:5199486-5199660 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-176
Cow position: chr7:14353726-14353900 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 1-189
Cow position: chr7:18188163-18188345 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 9

Conread position: 1-189
Cow position: chr7:49903835-49903652 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 60, 46

Conread position: 1-194
Cow position: chr7:23251500-23251686 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-198
Cow position: chr7:8272724-8272526 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 58, 44

Conread position: 1-213
Cow position: chr7:42593216-42593417 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 1-221
Cow position: chr7:46818432-46818650 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 89

Conread position: 1-226
Cow position: chr7:30816225-30816443 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 1-229
Cow position: chr7:4764907-4764681 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 172, 25

Conread position: 1-236
Cow position: chr7:33990015-33989794 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 74, 46

Conread position: 1-243
Cow position: chr7:52320849-52321089 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 48

Conread position: 1-260
Cow position: chr7:48714916-48714657 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-263
Cow position: chr7:32079514-32079265 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 45

Conread position: 1-263
Cow position: chr7:34084187-34084444 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 44

Conread position: 1-265
Cow position: chr7:48667477-48667231 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 64, 100

Conread position: 1-269
Cow position: chr7:55688134-55688397 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 73

Conread position: 1-270
Cow position: chr7:41879427-41879703 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 46

Conread position: 1-275
Cow position: chr7:10211-9939 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 13

Conread position: 1-278
Cow position: chr7:40303203-40303473 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 109, 47

Conread position: 1-279
Cow position: chr7:41315371-41315648 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 110

Conread position: 1-282
Cow position: chr7:16022357-16022089 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 0

Conread position: 1-282
Cow position: chr7:22793406-22793134 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 41

Conread position: 1-282
Cow position: chr7:48406433-48406713 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 63

Conread position: 1-282
Cow position: chr7:53053341-53053619 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 115

Conread position: 1-286
Cow position: chr7:27283740-27283462 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 35

Conread position: 1-287
Cow position: chr7:51319861-51319582 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1-292
Cow position: chr7:34223756-34223468 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 63, 44

Conread position: 1-292
Cow position: chr7:44049308-44049587 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 24

Conread position: 1-294
Cow position: chr7:23936173-23935891 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 1-294
Cow position: chr7:50095452-50095156 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 112

Conread position: 1-294
Cow position: chr7:56838444-56838722 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 1-295
Cow position: chr7:600398-600118 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 46

Conread position: 1-295
Cow position: chr7:3256283-3256569 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 42, 36

Conread position: 1-295
Cow position: chr7:36830717-36830437 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1-295
Cow position: chr7:64572997-64573286 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 68, 46

Conread position: 1-300
Cow position: chr7:27132893-27133189 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 60

Conread position: 1-303
Cow position: chr7:36278361-36278061 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 91

Conread position: 1-307
Cow position: chr7:34422204-34422499 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 46

Conread position: 1-310
Cow position: chr7:45331601-45331304 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-312
Cow position: chr7:10943498-10943795 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 1-325
Cow position: chr7:33698017-33697717 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 44

Conread position: 1-326
Cow position: chr7:12385208-12384901 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 122

Conread position: 1-329
Cow position: chr7:32915172-32914855 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-331
Cow position: chr7:14536215-14536530 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 1-331
Cow position: chr7:59843685-59844023 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 169

Conread position: 1-334
Cow position: chr7:40121529-40121186 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 151

Conread position: 1-334
Cow position: chr7:41327976-41328292 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 70, 46

Conread position: 1-334
Cow position: chr7:49751191-49750862 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 175

Conread position: 1-335
Cow position: chr7:9136900-9136576 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 179

Conread position: 1-335
Cow position: chr7:30276797-30276467 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 1-335
Cow position: chr7:32894186-32894519 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 46

Conread position: 1-335
Cow position: chr7:60483363-60483689 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 58

Conread position: 1-336
Cow position: chr7:2884403-2884077 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 66, 46

Conread position: 1-336
Cow position: chr7:4129718-4130059 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 1-336
Cow position: chr7:4452668-4452335 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 69

Conread position: 1-336
Cow position: chr7:6058190-6057862 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 91

Conread position: 1-336
Cow position: chr7:10512648-10512979 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 40

Conread position: 1-336
Cow position: chr7:11439525-11439858 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 1-336
Cow position: chr7:14542004-14542318 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-336
Cow position: chr7:26631751-26632078 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 46

Conread position: 1-336
Cow position: chr7:27079689-27079373 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr7:27509777-27509451 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-336
Cow position: chr7:28584309-28583980 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 59

Conread position: 1-336
Cow position: chr7:28917153-28916808 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 61

Conread position: 1-336
Cow position: chr7:32819881-32819545 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-336
Cow position: chr7:33393371-33393048 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 84

Conread position: 1-336
Cow position: chr7:34979442-34979102 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 174, 46

Conread position: 1-336
Cow position: chr7:35275015-35275335 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 175

Conread position: 1-336
Cow position: chr7:36665387-36665062 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 24

Conread position: 1-336
Cow position: chr7:38082218-38081893 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 43

Conread position: 1-336
Cow position: chr7:39325791-39325479 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr7:39904159-39903837 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 96

Conread position: 1-336
Cow position: chr7:39930351-39930014 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 274, 46

Conread position: 1-336
Cow position: chr7:40067723-40067383 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 35

Conread position: 1-336
Cow position: chr7:40074746-40074427 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 65

Conread position: 1-336
Cow position: chr7:40321550-40321228 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 48

Conread position: 1-336
Cow position: chr7:45927103-45927418 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 1-336
Cow position: chr7:46823732-46823413 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 46

Conread position: 1-336
Cow position: chr7:46856901-46857221 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr7:47382369-47382043 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 136, 19

Conread position: 1-336
Cow position: chr7:47513622-47513956 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 259

Conread position: 1-336
Cow position: chr7:49106137-49106466 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 57

Conread position: 1-336
Cow position: chr7:52784738-52785061 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 1-336
Cow position: chr7:59695424-59695095 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 48

Conread position: 1-336
Cow position: chr7:61817873-61818201 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 192

Conread position: 1-336
Cow position: chr7:62733249-62732920 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 224

Conread position: 1-336
Cow position: chr7:63749414-63749748 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 1-336
Cow position: chr7:68170537-68170873 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 112

Conread position: 1-337
Cow position: chr7:44596636-44596964 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 51, 30

Conread position: 2-150
Cow position: chr7:8102482-8102337 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 2-176
Cow position: chr7:28544238-28544065 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 2-193
Cow position: chr7:38263735-38263542 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 145, 0

Conread position: 2-202
Cow position: chr7:34214652-34214462 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 2-236
Cow position: chr7:20168611-20168387 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 2-244
Cow position: chr7:32372922-32372684 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 182, 0

Conread position: 2-262
Cow position: chr7:14174362-14174601 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 2-282
Cow position: chr7:47698074-47697812 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 63, 108

Conread position: 2-285
Cow position: chr7:57593491-57593226 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 2-294
Cow position: chr7:45747784-45748057 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 2-313
Cow position: chr7:53613205-53612900 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 45

Conread position: 2-325
Cow position: chr7:20537428-20537107 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 169

Conread position: 2-325
Cow position: chr7:34412212-34412542 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 45

Conread position: 2-331
Cow position: chr7:39042659-39042343 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 45

Conread position: 2-335
Cow position: chr7:3336489-3336805 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 57

Conread position: 2-335
Cow position: chr7:26771932-26771604 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 54, 137

Conread position: 2-336
Cow position: chr7:30665332-30664995 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 26

Conread position: 3-150
Cow position: chr7:10381864-10381717 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-185
Cow position: chr7:58923458-58923276 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 44

Conread position: 3-229
Cow position: chr7:29479588-29479362 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 57

Conread position: 3-292
Cow position: chr7:48547801-48548082 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 113, 30

Conread position: 3-294
Cow position: chr7:8777268-8776974 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 26

Conread position: 3-327
Cow position: chr7:57537463-57537785 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 59

Conread position: 3-336
Cow position: chr7:10122758-10122444 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 287, 44

Conread position: 3-336
Cow position: chr7:31094287-31094608 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 3-336
Cow position: chr7:40758172-40758512 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 59, 30

Conread position: 3-336
Cow position: chr7:56820522-56820838 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 4-208
Cow position: chr7:5300332-5300530 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 56

Conread position: 4-226
Cow position: chr7:21565501-21565707 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 43

Conread position: 4-294
Cow position: chr7:17713412-17713689 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 4-294
Cow position: chr7:40263594-40263878 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 43

Conread position: 4-335
Cow position: chr7:31170889-31171213 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 4-336
Cow position: chr7:37361939-37361617 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 4-336
Cow position: chr7:43711278-43710952 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 42

Conread position: 4-336
Cow position: chr7:62193626-62193300 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 5-304
Cow position: chr7:39415968-39415670 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 5-325
Cow position: chr7:63378449-63378138 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 127, 15

Conread position: 5-336
Cow position: chr7:23679533-23679859 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 5-336
Cow position: chr7:42431887-42431558 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 5-336
Cow position: chr7:51910188-51909865 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 6-234
Cow position: chr7:8977762-8977987 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 7-267
Cow position: chr7:3283420-3283163 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 7-267
Cow position: chr7:3311900-3311643 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 41

Conread position: 7-279
Cow position: chr7:67816960-67816698 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 256, 82

Conread position: 7-304
Cow position: chr7:46148915-46148631 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 95

Conread position: 7-334
Cow position: chr7:24991323-24991018 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 7-336
Cow position: chr7:11607599-11607274 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 41

Conread position: 9-202
Cow position: chr7:27486825-27486627 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 11

Conread position: 9-263
Cow position: chr7:24564565-24564811 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 11

Conread position: 9-280
Cow position: chr7:7142006-7142278 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 11

Conread position: 9-336
Cow position: chr7:8877932-8877610 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 10-141
Cow position: chr7:60732583-60732715 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 10-328
Cow position: chr7:6042026-6041733 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 281, 28

Conread position: 10-331
Cow position: chr7:15570091-15569783 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 26

Conread position: 11-219
Cow position: chr7:37394362-37394167 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 11-307
Cow position: chr7:57610812-57610516 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 64

Conread position: 12-209
Cow position: chr7:9781675-9781871 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 128, 8

Conread position: 12-270
Cow position: chr7:43882130-43881877 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 126, 8

Conread position: 12-297
Cow position: chr7:33505117-33504836 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 128, 44

Conread position: 12-336
Cow position: chr7:14005929-14005608 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 8

Conread position: 12-336
Cow position: chr7:34428625-34428294 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 7

Conread position: 13-205
Cow position: chr7:21166194-21166387 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 7

Conread position: 14-334
Cow position: chr7:61823802-61824118 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 172

Conread position: 14-336
Cow position: chr7:43908255-43907945 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 100

Conread position: 15-270
Cow position: chr7:61765366-61765113 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 32

Conread position: 15-287
Cow position: chr7:39528943-39529221 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 30

Conread position: 15-336
Cow position: chr7:21573341-21573019 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 97

Conread position: 15-336
Cow position: chr7:34554314-34553982 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 43

Conread position: 18-303
Cow position: chr7:58862836-58863113 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 37, 27

Conread position: 20-335
Cow position: chr7:1375737-1375429 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 8

Conread position: 20-336
Cow position: chr7:36569898-36569596 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 20-336
Cow position: chr7:39402003-39401691 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 21-233
Cow position: chr7:47936874-47937085 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 28

Conread position: 21-236
Cow position: chr7:52680887-52680672 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 29

Conread position: 22-185
Cow position: chr7:13295973-13296138 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 22-219
Cow position: chr7:9800394-9800205 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 25

Conread position: 22-243
Cow position: chr7:61790311-61790529 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 49, 66

Conread position: 23-208
Cow position: chr7:8260983-8261164 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 94, 23

Conread position: 24-292
Cow position: chr7:25015074-25015342 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 228

Conread position: 24-294
Cow position: chr7:25023412-25023682 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 228

Conread position: 24-321
Cow position: chr7:65122385-65122090 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 8

Conread position: 25-229
Cow position: chr7:43894868-43894664 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 112, 28

Conread position: 26-218
Cow position: chr7:14482103-14481908 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 16

Conread position: 26-220
Cow position: chr7:35742364-35742556 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 155

Conread position: 26-257
Cow position: chr7:4864005-4864224 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 27

Conread position: 26-258
Cow position: chr7:67873230-67872993 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 21

Conread position: 26-260
Cow position: chr7:11715752-11715513 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 26-274
Cow position: chr7:44986691-44986453 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 18

Conread position: 26-286
Cow position: chr7:12212562-12212823 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 50

Conread position: 26-320
Cow position: chr7:23646644-23646352 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 26-330
Cow position: chr7:53097628-53097338 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 26-332
Cow position: chr7:27990643-27990941 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 26-333
Cow position: chr7:40189592-40189287 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 253, 30

Conread position: 26-334
Cow position: chr7:7476410-7476711 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 45, 109

Conread position: 26-336
Cow position: chr7:22357445-22357755 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 21

Conread position: 26-336
Cow position: chr7:28090271-28089974 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 26-336
Cow position: chr7:35652035-35652343 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 26-336
Cow position: chr7:39155151-39154841 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 154

Conread position: 26-336
Cow position: chr7:47547446-47547128 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 26-336
Cow position: chr7:48359044-48358750 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 23

Conread position: 27-292
Cow position: chr7:66748487-66748747 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 23

Conread position: 27-335
Cow position: chr7:19267330-19267635 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 20

Conread position: 27-336
Cow position: chr7:41131268-41131578 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 28-260
Cow position: chr7:50860044-50859818 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 28-292
Cow position: chr7:6706335-6706074 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 110, 19

Conread position: 28-318
Cow position: chr7:56886749-56887028 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 28-336
Cow position: chr7:62793823-62793517 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 157

Conread position: 30-336
Cow position: chr7:23619048-23619352 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 156

Conread position: 31-274
Cow position: chr7:43676969-43677214 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 45

Conread position: 31-331
Cow position: chr7:10942813-10943115 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 260

Conread position: 31-336
Cow position: chr7:40324431-40324122 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 31-336
Cow position: chr7:61551936-61551637 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 39

Conread position: 32-261
Cow position: chr7:6745238-6745009 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 106, 141

Conread position: 32-336
Cow position: chr7:58362984-58362668 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 281

Conread position: 34-336
Cow position: chr7:34199360-34199057 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 35-274
Cow position: chr7:30304153-30303915 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 11

Conread position: 35-336
Cow position: chr7:1032477-1032781 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 11

Conread position: 35-336
Cow position: chr7:8139805-8140110 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 38-336
Cow position: chr7:32710947-32711247 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 42-294
Cow position: chr7:42244669-42244921 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 58

Conread position: 42-304
Cow position: chr7:40008844-40008583 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 42-334
Cow position: chr7:17757065-17756780 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 146

Conread position: 42-334
Cow position: chr7:21650130-21649838 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 138

Conread position: 43-292
Cow position: chr7:18858366-18858118 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 8

Conread position: 43-336
Cow position: chr7:19399658-19399940 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 45-219
Cow position: chr7:43055681-43055849 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 88, 25

Conread position: 45-290
Cow position: chr7:42894467-42894230 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 134

Conread position: 45-334
Cow position: chr7:205762-205491 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 192, 63

Conread position: 47-281
Cow position: chr7:5914220-5913991 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 47-320
Cow position: chr7:67820137-67819870 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 87

Conread position: 48-327
Cow position: chr7:11066497-11066216 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 139

Conread position: 49-221
Cow position: chr7:6820916-6820736 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 49-261
Cow position: chr7:24932395-24932605 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 125

Conread position: 49-263
Cow position: chr7:12201905-12202110 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 137

Conread position: 49-301
Cow position: chr7:29302336-29302587 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 89, 8

Conread position: 49-321
Cow position: chr7:26911422-26911686 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 119

Conread position: 49-326
Cow position: chr7:58170756-58170484 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 70

Conread position: 49-336
Cow position: chr7:20968448-20968165 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 50-173
Cow position: chr7:42636995-42636873 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 50-236
Cow position: chr7:53763567-53763751 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 9, 121

Conread position: 50-286
Cow position: chr7:45955942-45955710 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 20

Conread position: 50-304
Cow position: chr7:31315328-31315088 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 50-325
Cow position: chr7:4418447-4418715 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 51-292
Cow position: chr7:31881693-31881465 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 135

Conread position: 51-292
Cow position: chr7:69066711-69066473 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 233, 88

Conread position: 51-295
Cow position: chr7:29027165-29026947 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 15, 58

Conread position: 51-336
Cow position: chr7:23657849-23657565 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 51-336
Cow position: chr7:35062157-35061872 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 123

Conread position: 51-336
Cow position: chr7:39529804-39530091 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 206

Conread position: 52-262
Cow position: chr7:5583166-5582959 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 110

Conread position: 52-291
Cow position: chr7:26665542-26665779 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 7

Conread position: 52-292
Cow position: chr7:59645849-59646084 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 7, 0

Conread position: 53-266
Cow position: chr7:59168284-59168081 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 143, 112

Conread position: 53-274
Cow position: chr7:26737329-26737544 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 53-331
Cow position: chr7:53772318-53772573 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 129, 0

Conread position: 53-336
Cow position: chr7:14632386-14632110 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 54-336
Cow position: chr7:27127349-27127631 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 19

Conread position: 55-218
Cow position: chr7:49683339-49683504 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 55-314
Cow position: chr7:2931712-2931451 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 55-317
Cow position: chr7:68518041-68518304 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 176

Conread position: 55-327
Cow position: chr7:65689519-65689788 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 55-328
Cow position: chr7:14538223-14538497 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 121

Conread position: 55-329
Cow position: chr7:68392532-68392261 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 10, 112

Conread position: 55-333
Cow position: chr7:40283377-40283661 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 62

Conread position: 55-335
Cow position: chr7:24986453-24986157 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 55-336
Cow position: chr7:9080390-9080108 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 92

Conread position: 55-336
Cow position: chr7:18391583-18391308 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 32

Conread position: 55-336
Cow position: chr7:51780733-51780445 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 74

Conread position: 56-277
Cow position: chr7:25104378-25104157 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 55

Conread position: 56-304
Cow position: chr7:27361096-27360846 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 56-336
Cow position: chr7:38024301-38024578 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 135

Conread position: 57-217
Cow position: chr7:18306454-18306615 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 54

Conread position: 57-225
Cow position: chr7:40336048-40335883 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 25

Conread position: 57-295
Cow position: chr7:24213892-24213655 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 81, 123

Conread position: 57-334
Cow position: chr7:68753678-68753955 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 121

Conread position: 57-335
Cow position: chr7:13805395-13805673 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 85, 203

Conread position: 57-336
Cow position: chr7:6624924-6625206 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 57-336
Cow position: chr7:34716255-34715971 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 13

Conread position: 57-336
Cow position: chr7:65441177-65440907 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 10, 116

Conread position: 57-397
Cow position: chr7:4112123-4112464 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 6, 256

Conread position: 58-336
Cow position: chr7:64013643-64013363 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 59-294
Cow position: chr7:25263381-25263142 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 134

Conread position: 59-324
Cow position: chr7:28324643-28324380 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 8

Conread position: 59-336
Cow position: chr7:23664083-23664361 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 251

Conread position: 59-336
Cow position: chr7:53992705-53992435 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 7

Conread position: 60-215
Cow position: chr7:11960422-11960269 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 60-279
Cow position: chr7:10345418-10345643 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 60-282
Cow position: chr7:57162157-57161936 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 78, 132

Conread position: 60-337
Cow position: chr7:26838663-26838386 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 11, 113

Conread position: 61-322
Cow position: chr7:8812923-8813176 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 8

Conread position: 61-335
Cow position: chr7:62603189-62602931 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 124

Conread position: 62-336
Cow position: chr7:6816193-6816465 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 80, 119

Conread position: 63-336
Cow position: chr7:61129224-61128952 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 135

Conread position: 66-300
Cow position: chr7:55316478-55316703 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 95, 44

Conread position: 67-294
Cow position: chr7:19616703-19616920 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 113

Conread position: 68-335
Cow position: chr7:23099046-23099299 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 70-269
Cow position: chr7:30155958-30156158 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 72, 0

Conread position: 70-294
Cow position: chr7:147407-147186 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 95

Conread position: 70-295
Cow position: chr7:43184797-43184578 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 26

Conread position: 71-336
Cow position: chr7:24796697-24796956 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 66, 105

Conread position: 71-336
Cow position: chr7:36746316-36746052 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 10

Conread position: 72-241
Cow position: chr7:5399050-5399219 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 111, 25

Conread position: 72-278
Cow position: chr7:530196-529993 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 70, 98

Conread position: 72-282
Cow position: chr7:65865900-65866104 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 104, 66

Conread position: 72-294
Cow position: chr7:41475626-41475406 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 68, 107

Conread position: 72-332
Cow position: chr7:59775542-59775281 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 72-336
Cow position: chr7:48069141-48068878 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 62

Conread position: 72-425
Cow position: chr7:10448787-10449139 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 74-257
Cow position: chr7:6800560-6800743 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 74-289
Cow position: chr7:7106794-7107002 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 74-331
Cow position: chr7:54580899-54580651 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 106

Conread position: 75-341
Cow position: chr7:32240619-32240361 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 51

Conread position: 76-248
Cow position: chr7:32905972-32906149 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 76-297
Cow position: chr7:54513420-54513649 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 184

Conread position: 76-329
Cow position: chr7:27136491-27136237 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 76-337
Cow position: chr7:12995150-12994897 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 77-335
Cow position: chr7:24778127-24778377 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 100

Conread position: 81-253
Cow position: chr7:23057742-23057912 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 81-336
Cow position: chr7:10069728-10069969 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 71

Conread position: 89-300
Cow position: chr7:42460407-42460203 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 90

Conread position: 89-337
Cow position: chr7:18247829-18248076 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 139, 95

Conread position: 90-336
Cow position: chr7:23477349-23477571 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.