Cow genome map

Conread name: Tra1-TCH01A060005

Conread position: 1-139
Cow position: chr9:6596227-6596090 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 1-163
Cow position: chr9:5263507-5263669 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 122

Conread position: 1-165
Cow position: chr9:39011460-39011306 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-167
Cow position: chr9:25556981-25557138 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 46

Conread position: 1-175
Cow position: chr9:11168739-11168911 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 70, 47

Conread position: 1-187
Cow position: chr9:41728267-41728448 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 72

Conread position: 1-194
Cow position: chr9:4341150-4340970 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 1-197
Cow position: chr9:50543417-50543221 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 46

Conread position: 1-203
Cow position: chr9:3738215-3738013 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 38

Conread position: 1-204
Cow position: chr9:19493457-19493253 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 56

Conread position: 1-208
Cow position: chr9:61303009-61303217 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 1-214
Cow position: chr9:30195223-30195429 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 1-218
Cow position: chr9:17799635-17799850 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 67, 163

Conread position: 1-219
Cow position: chr9:48628037-48628251 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 55, 42

Conread position: 1-220
Cow position: chr9:27279318-27279540 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 132, 46

Conread position: 1-225
Cow position: chr9:53762705-53762928 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 101, 0

Conread position: 1-229
Cow position: chr9:12175704-12175931 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 141, 49

Conread position: 1-229
Cow position: chr9:15225287-15225059 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 35

Conread position: 1-246
Cow position: chr9:5209589-5209832 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 44

Conread position: 1-247
Cow position: chr9:33119879-33119633 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 46

Conread position: 1-263
Cow position: chr9:55889820-55890075 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 35

Conread position: 1-265
Cow position: chr9:4192435-4192173 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 48

Conread position: 1-266
Cow position: chr9:34286808-34287062 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 136

Conread position: 1-277
Cow position: chr9:8562843-8563120 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 52

Conread position: 1-279
Cow position: chr9:1712467-1712207 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 0

Conread position: 1-280
Cow position: chr9:41283024-41283310 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 127, 46

Conread position: 1-280
Cow position: chr9:56453345-56453615 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 48

Conread position: 1-286
Cow position: chr9:45384334-45384049 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 48

Conread position: 1-287
Cow position: chr9:10144469-10144183 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 12

Conread position: 1-290
Cow position: chr9:9416387-9416115 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 136, 46

Conread position: 1-291
Cow position: chr9:17310556-17310269 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 70, 58

Conread position: 1-294
Cow position: chr9:9406044-9405759 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 63

Conread position: 1-306
Cow position: chr9:45285526-45285223 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 1-324
Cow position: chr9:29035027-29034702 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 32

Conread position: 1-326
Cow position: chr9:34958047-34957724 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 44

Conread position: 1-334
Cow position: chr9:13169654-13169337 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 1-334
Cow position: chr9:31079073-31078747 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 45

Conread position: 1-335
Cow position: chr9:9552099-9552422 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 45

Conread position: 1-335
Cow position: chr9:15805914-15805584 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 45

Conread position: 1-335
Cow position: chr9:38793025-38793356 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 46

Conread position: 1-335
Cow position: chr9:56773090-56773416 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr9:1569430-1569762 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 1-336
Cow position: chr9:1952261-1951932 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 1-336
Cow position: chr9:3410790-3411106 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 46

Conread position: 1-336
Cow position: chr9:3934229-3933896 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 58

Conread position: 1-336
Cow position: chr9:4267973-4267655 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr9:5219161-5218842 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 56

Conread position: 1-336
Cow position: chr9:5433641-5433969 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 168

Conread position: 1-336
Cow position: chr9:5509733-5510062 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr9:6887725-6887389 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 141, 48

Conread position: 1-336
Cow position: chr9:8998358-8998693 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 181

Conread position: 1-336
Cow position: chr9:17740933-17740607 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 24

Conread position: 1-336
Cow position: chr9:19714089-19714408 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 137, 46

Conread position: 1-336
Cow position: chr9:21888177-21888507 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 40

Conread position: 1-336
Cow position: chr9:22361019-22361351 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 1-336
Cow position: chr9:22802525-22802852 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 141, 59

Conread position: 1-336
Cow position: chr9:24872842-24873178 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 164, 99

Conread position: 1-336
Cow position: chr9:24997510-24997166 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 44

Conread position: 1-336
Cow position: chr9:28747511-28747187 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-336
Cow position: chr9:28786482-28786151 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 1-336
Cow position: chr9:33681683-33682013 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 185

Conread position: 1-336
Cow position: chr9:38343896-38344233 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 57

Conread position: 1-336
Cow position: chr9:41789293-41789625 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 272, 46

Conread position: 1-336
Cow position: chr9:42445974-42445635 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 170

Conread position: 1-336
Cow position: chr9:45141591-45141289 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr9:46316774-46316450 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-336
Cow position: chr9:54528521-54528853 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 1-336
Cow position: chr9:64091689-64092024 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 44

Conread position: 1-337
Cow position: chr9:44832046-44831718 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 94

Conread position: 2-190
Cow position: chr9:12910391-12910203 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 45

Conread position: 2-195
Cow position: chr9:9654301-9654112 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 16

Conread position: 2-224
Cow position: chr9:1938140-1938352 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 2-294
Cow position: chr9:26279159-26278881 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 2-298
Cow position: chr9:32371747-32371460 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 45

Conread position: 2-325
Cow position: chr9:7634281-7634595 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 171

Conread position: 2-331
Cow position: chr9:5500863-5501182 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 177

Conread position: 2-335
Cow position: chr9:50606938-50606616 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 2-336
Cow position: chr9:5763623-5763292 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 2-336
Cow position: chr9:20847939-20848275 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 2-336
Cow position: chr9:28773131-28773455 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-336
Cow position: chr9:29185127-29184799 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 185

Conread position: 2-336
Cow position: chr9:44921383-44921074 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 177, 0

Conread position: 2-336
Cow position: chr9:63745819-63746139 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 48

Conread position: 2-347
Cow position: chr9:29006567-29006908 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 157

Conread position: 3-222
Cow position: chr9:30162167-30162387 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 47

Conread position: 3-294
Cow position: chr9:19067793-19068095 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 62, 43

Conread position: 3-334
Cow position: chr9:6089099-6089439 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 99

Conread position: 3-334
Cow position: chr9:23388668-23388343 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 55

Conread position: 3-335
Cow position: chr9:3931971-3932302 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 30

Conread position: 3-336
Cow position: chr9:5442000-5442327 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 3-336
Cow position: chr9:21460143-21459817 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 90

Conread position: 3-336
Cow position: chr9:22114625-22114302 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 22

Conread position: 3-336
Cow position: chr9:54206314-54205990 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 29

Conread position: 4-176
Cow position: chr9:43875705-43875540 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 43

Conread position: 4-243
Cow position: chr9:43757553-43757768 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 4-296
Cow position: chr9:50544618-50544335 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 16

Conread position: 4-348
Cow position: chr9:5227161-5226814 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 5-155
Cow position: chr9:42509129-42509275 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 124
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 43

Conread position: 5-158
Cow position: chr9:49293130-49292982 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-328
Cow position: chr9:6879784-6880098 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 46, 53

Conread position: 6-336
Cow position: chr9:59507103-59507409 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 104

Conread position: 7-272
Cow position: chr9:9403159-9402911 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 7-278
Cow position: chr9:17928772-17929053 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 61, 36

Conread position: 7-294
Cow position: chr9:20091062-20091336 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 277, 40

Conread position: 7-335
Cow position: chr9:28726709-28726389 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 168

Conread position: 7-336
Cow position: chr9:18380877-18381198 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 24

Conread position: 7-336
Cow position: chr9:45877681-45877354 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 42

Conread position: 7-336
Cow position: chr9:45974207-45974533 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 135, 49

Conread position: 7-336
Cow position: chr9:52449298-52448973 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 42

Conread position: 10-236
Cow position: chr9:5238414-5238634 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 33

Conread position: 10-288
Cow position: chr9:59013324-59013045 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 42, 93

Conread position: 10-334
Cow position: chr9:11299672-11299361 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 10-336
Cow position: chr9:28983200-28983524 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 274, 118

Conread position: 11-185
Cow position: chr9:30123938-30124111 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 76, 0

Conread position: 11-281
Cow position: chr9:35306099-35305837 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 36

Conread position: 11-310
Cow position: chr9:36490879-36490583 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 34

Conread position: 12-226
Cow position: chr9:6338815-6339030 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 8

Conread position: 12-336
Cow position: chr9:5245875-5246183 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 97

Conread position: 14-336
Cow position: chr9:34666442-34666746 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 15-239
Cow position: chr9:33038441-33038216 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 94

Conread position: 15-241
Cow position: chr9:40603968-40604193 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 32

Conread position: 19-267
Cow position: chr9:41652813-41653058 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 21-200
Cow position: chr9:47500183-47500001 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 25

Conread position: 22-294
Cow position: chr9:49403789-49404050 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 25

Conread position: 24-300
Cow position: chr9:36066937-36067207 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 45, 23

Conread position: 25-249
Cow position: chr9:38614931-38614715 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 22

Conread position: 25-252
Cow position: chr9:58979430-58979655 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 25-292
Cow position: chr9:10666993-10666731 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 91, 8

Conread position: 25-333
Cow position: chr9:20942578-20942277 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 115, 28

Conread position: 25-336
Cow position: chr9:4928658-4928963 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 26-188
Cow position: chr9:40543291-40543128 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 30

Conread position: 26-220
Cow position: chr9:50667455-50667646 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 21

Conread position: 26-222
Cow position: chr9:41469832-41469634 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 110, 33

Conread position: 26-272
Cow position: chr9:32732657-32732411 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 110, 92

Conread position: 26-287
Cow position: chr9:44709859-44710110 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 114, 21

Conread position: 26-288
Cow position: chr9:60037684-60037945 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 165

Conread position: 26-336
Cow position: chr9:18002920-18002614 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 31

Conread position: 26-336
Cow position: chr9:21030342-21030655 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 21

Conread position: 26-336
Cow position: chr9:55075098-55074797 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 25

Conread position: 27-327
Cow position: chr9:22228045-22227756 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 26

Conread position: 27-334
Cow position: chr9:22443592-22443279 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 20

Conread position: 27-336
Cow position: chr9:34697273-34696958 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 42

Conread position: 28-271
Cow position: chr9:51620472-51620708 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 21

Conread position: 33-277
Cow position: chr9:17806034-17806273 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 12

Conread position: 33-334
Cow position: chr9:20989418-20989119 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 35-230
Cow position: chr9:32306561-32306362 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 11

Conread position: 35-332
Cow position: chr9:1650054-1650359 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 36-336
Cow position: chr9:34310071-34310372 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 38-222
Cow position: chr9:35303253-35303068 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 38-286
Cow position: chr9:3070381-3070135 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 136

Conread position: 38-292
Cow position: chr9:4126764-4127022 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 38-295
Cow position: chr9:18073069-18072821 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 39-336
Cow position: chr9:62698756-62698465 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 165, 0

Conread position: 40-336
Cow position: chr9:39971087-39971371 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 85

Conread position: 42-198
Cow position: chr9:8524881-8525040 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 129

Conread position: 42-242
Cow position: chr9:49709885-49710088 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 49

Conread position: 42-295
Cow position: chr9:27052290-27052034 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 29

Conread position: 42-317
Cow position: chr9:57897070-57896808 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 26, 0

Conread position: 42-324
Cow position: chr9:64155811-64155530 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 23

Conread position: 42-327
Cow position: chr9:5393098-5393379 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 42-334
Cow position: chr9:3924674-3924954 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 17

Conread position: 42-336
Cow position: chr9:32812389-32812684 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 220

Conread position: 45-292
Cow position: chr9:35849952-35850192 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 7, 43

Conread position: 45-336
Cow position: chr9:41679795-41680071 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 134

Conread position: 46-279
Cow position: chr9:5531997-5532233 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 217

Conread position: 46-336
Cow position: chr9:47172159-47171863 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 0

Conread position: 47-336
Cow position: chr9:18121255-18121543 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 6

Conread position: 48-263
Cow position: chr9:63905557-63905339 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 48-278
Cow position: chr9:55287839-55287611 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 47

Conread position: 48-336
Cow position: chr9:1520687-1520391 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 209

Conread position: 49-277
Cow position: chr9:44108774-44108551 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 49-283
Cow position: chr9:6225401-6225161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 133

Conread position: 49-295
Cow position: chr9:8600380-8600634 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 154

Conread position: 49-336
Cow position: chr9:34000570-34000274 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 43

Conread position: 50-166
Cow position: chr9:4324105-4323986 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 50-265
Cow position: chr9:8546376-8546585 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 62, 0

Conread position: 50-265
Cow position: chr9:49206346-49206134 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 7

Conread position: 50-266
Cow position: chr9:41995763-41995982 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 50-278
Cow position: chr9:27077190-27076971 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 27

Conread position: 50-282
Cow position: chr9:61847095-61846866 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 136

Conread position: 50-336
Cow position: chr9:6934018-6933734 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 68

Conread position: 50-336
Cow position: chr9:33055869-33056159 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 92, 9

Conread position: 50-337
Cow position: chr9:22318405-22318677 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 50-337
Cow position: chr9:54997976-54997686 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 248

Conread position: 51-181
Cow position: chr9:9823449-9823319 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 51-279
Cow position: chr9:16182432-16182210 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 51-336
Cow position: chr9:44467295-44467011 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 52-257
Cow position: chr9:28735538-28735739 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 16

Conread position: 53-229
Cow position: chr9:32710985-32711163 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 120

Conread position: 53-260
Cow position: chr9:38846285-38846087 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 53-331
Cow position: chr9:54924681-54924964 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 63, 15

Conread position: 53-336
Cow position: chr9:8997607-8997894 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 53-336
Cow position: chr9:42998410-42998124 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 127

Conread position: 53-336
Cow position: chr9:57951267-57950992 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 24

Conread position: 54-222
Cow position: chr9:32829947-32829792 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 54-253
Cow position: chr9:3782421-3782618 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 23

Conread position: 54-334
Cow position: chr9:5141137-5141409 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 129

Conread position: 55-216
Cow position: chr9:51011485-51011322 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 55

Conread position: 55-220
Cow position: chr9:11186146-11186311 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 111

Conread position: 55-274
Cow position: chr9:30735772-30735995 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 55-300
Cow position: chr9:2135545-2135289 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 55-307
Cow position: chr9:27290226-27289972 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 55-336
Cow position: chr9:10566266-10566555 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 55-336
Cow position: chr9:55425920-55425643 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 124

Conread position: 56-245
Cow position: chr9:61493082-61493274 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 56-288
Cow position: chr9:63595218-63594988 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 208

Conread position: 56-294
Cow position: chr9:58673800-58674037 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 47

Conread position: 56-327
Cow position: chr9:33101075-33100813 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 56-336
Cow position: chr9:1855328-1855616 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 25

Conread position: 56-336
Cow position: chr9:3192622-3192340 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 57-242
Cow position: chr9:767091-766906 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 138

Conread position: 57-242
Cow position: chr9:32815704-32815882 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 57-288
Cow position: chr9:29825098-29825319 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 128

Conread position: 57-329
Cow position: chr9:53413186-53412919 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 62

Conread position: 57-335
Cow position: chr9:19539152-19539434 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 57-336
Cow position: chr9:2547610-2547887 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 191

Conread position: 57-336
Cow position: chr9:53608333-53608056 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 180

Conread position: 59-278
Cow position: chr9:40542184-40542394 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 81, 16

Conread position: 59-292
Cow position: chr9:41513687-41513913 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 16, 55

Conread position: 59-336
Cow position: chr9:7409841-7410120 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 125

Conread position: 59-336
Cow position: chr9:49983034-49982759 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 9

Conread position: 59-336
Cow position: chr9:52505245-52504966 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 9

Conread position: 59-350
Cow position: chr9:7866128-7866417 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 73, 13

Conread position: 60-327
Cow position: chr9:10118599-10118337 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 118

Conread position: 60-336
Cow position: chr9:34093370-34093076 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 13, 195

Conread position: 60-336
Cow position: chr9:54672188-54672465 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 0

Conread position: 61-307
Cow position: chr9:20319012-20318769 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 7

Conread position: 62-258
Cow position: chr9:38875509-38875314 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 80, 125

Conread position: 62-279
Cow position: chr9:37069502-37069288 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 115

Conread position: 68-274
Cow position: chr9:19637562-19637363 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 68-336
Cow position: chr9:37528527-37528794 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 68-341
Cow position: chr9:8950980-8951249 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 57, 49

Conread position: 70-282
Cow position: chr9:64007788-64007578 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 19

Conread position: 70-295
Cow position: chr9:55084222-55084000 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 57

Conread position: 70-331
Cow position: chr9:10308933-10308674 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 93

Conread position: 70-334
Cow position: chr9:17411116-17410853 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 87, 58

Conread position: 70-336
Cow position: chr9:9490868-9491126 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 67, 19

Conread position: 70-336
Cow position: chr9:36445704-36445959 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 71-335
Cow position: chr9:30402344-30402080 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 88

Conread position: 72-286
Cow position: chr9:22753859-22754065 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 72-335
Cow position: chr9:31640245-31639981 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 72-336
Cow position: chr9:12194152-12194416 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 74-242
Cow position: chr9:51004970-51005131 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 76-270
Cow position: chr9:55118161-55118350 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 125, 0

Conread position: 76-280
Cow position: chr9:10877790-10877584 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 102

Conread position: 76-316
Cow position: chr9:50977166-50976928 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 118

Conread position: 79-273
Cow position: chr9:22440425-22440248 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 81-209
Cow position: chr9:52638074-52637945 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 81-336
Cow position: chr9:5161978-5161736 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 98

Conread position: 83-336
Cow position: chr9:824047-824293 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 88

Conread position: 84-336
Cow position: chr9:38184395-38184140 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 87-206
Cow position: chr9:23970833-23970714 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 88-334
Cow position: chr9:22616718-22616955 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 0

Conread position: 90-294
Cow position: chr9:26310650-26310854 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 91-334
Cow position: chr9:35100964-35101210 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 208, 93

Conread position: 92-336
Cow position: chr9:31662561-31662804 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 169

Show alignments to all cow chromosomes.