Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               268, 21
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               302
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               267, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               267, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               299
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               1-476
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               2-155
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-430
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               295
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               4-376
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               9-321
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               9-429
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               11-319
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               11-430
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               12-165
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               21-165
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 101
               

               Conread position:
               24-266
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               43, 145
               

               Conread position:
               56-437
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               284
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               8, 153
               

               Conread position:
               171-430
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 9
               

               Conread position:
               186-426
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               83, 172
               

               Conread position:
               190-412
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               79, 98
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               190-446
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               191-428
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               74, 106
               

               Conread position:
               192-428
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 95
               

               Conread position:
               272-428
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 24
               
Show alignments to all cow chromosomes.