Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-164 |
| Cow position: | chr12:39557204-39557367 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-164 |
| Cow position: | chr12:43567168-43567005 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr12:1021938-1022099 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-165 |
| Cow position: | chr12:27845406-27845570 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 1-165 |
| Cow position: | chr12:28825900-28826063 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-165 |
| Cow position: | chr12:40313901-40313743 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr12:41812678-41812515 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-269 |
| Cow position: | chr12:5949980-5949704 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 206 |
| Conread position: | 1-269 |
| Cow position: | chr12:7663706-7663979 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 1-417 |
| Cow position: | chr12:40057564-40057164 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 1-420 |
| Cow position: | chr12:37430444-37430850 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-427 |
| Cow position: | chr12:42071011-42070594 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 1-428 |
| Cow position: | chr12:5938556-5938972 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr12:24102190-24101774 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr12:27775920-27776333 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 1-428 |
| Cow position: | chr12:42838704-42838290 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 2-136 |
| Cow position: | chr12:26553590-26553724 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 2-165 |
| Cow position: | chr12:37403991-37404153 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 24-165 |
| Cow position: | chr12:32100961-32101104 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 24-247 |
| Cow position: | chr12:27666611-27666387 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 107-270 |
| Cow position: | chr12:35466737-35466897 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 190-428 |
| Cow position: | chr12:2261112-2260865 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 190-428 |
| Cow position: | chr12:15179840-15179593 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 97 |
| Conread position: | 264-428 |
| Cow position: | chr12:7663994-7664159 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 7 |
Show alignments to all cow chromosomes.