Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-165 |
| Cow position: | chr14:8808371-8808207 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr14:23934933-23935097 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr14:24208193-24208357 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-165 |
| Cow position: | chr14:26865084-26865246 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-165 |
| Cow position: | chr14:36601858-36602017 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-165 |
| Cow position: | chr14:49754208-49754046 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 1-166 |
| Cow position: | chr14:31352636-31352471 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-268 |
| Cow position: | chr14:15754486-15754753 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 1-270 |
| Cow position: | chr14:27936964-27937225 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 145, 24 |
| Conread position: | 1-419 |
| Cow position: | chr14:27731773-27732192 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 1-428 |
| Cow position: | chr14:2335935-2336352 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr14:11143174-11142757 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 296 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-428 |
| Cow position: | chr14:12334684-12334267 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr14:12356848-12357266 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 288 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 1-428 |
| Cow position: | chr14:35326550-35326966 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 267, 21 |
| Conread position: | 1-428 |
| Cow position: | chr14:38884911-38885328 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr14:40069667-40070071 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 290 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 1-436 |
| Cow position: | chr14:21347001-21347420 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 3-165 |
| Cow position: | chr14:43170367-43170529 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 6-161 |
| Cow position: | chr14:3512521-3512366 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 9-428 |
| Cow position: | chr14:22649833-22650239 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 9-428 |
| Cow position: | chr14:40150589-40150184 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 289 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 256, 12 |
| Conread position: | 24-269 |
| Cow position: | chr14:29173030-29172785 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 24-425 |
| Cow position: | chr14:2271864-2272253 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 40, 93 |
| Conread position: | 36-166 |
| Cow position: | chr14:21315706-21315838 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 63-428 |
| Cow position: | chr14:37660385-37660027 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 208, 71 |
| Conread position: | 191-428 |
| Cow position: | chr14:33157507-33157268 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 78, 54 |
Show alignments to all cow chromosomes.