Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               296
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               277, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               303
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               306
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               2-158
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               2-266
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               304
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               3-359
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               8-162
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               9-426
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               21-166
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-166
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               24-166
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               24-268
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               24-428
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               283
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               40, 145
               

               Conread position:
               24-430
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               246, 103
               

               Conread position:
               25-426
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               43-428
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 124
               

               Conread position:
               127-428
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 60
               

               Conread position:
               190-432
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 97
               
Show alignments to all cow chromosomes.