Cow genome map

Conread name: Tra1-TCH01A090068

Conread position: 1-163
Cow position: chr17:6369271-6369110 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 21

Conread position: 1-165
Cow position: chr17:6528364-6528200 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr17:12960004-12959840 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 21

Conread position: 1-165
Cow position: chr17:21619052-21619216 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 65, 21

Conread position: 1-165
Cow position: chr17:23459923-23460087 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 21

Conread position: 1-165
Cow position: chr17:24860799-24860957 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 1-165
Cow position: chr17:25148633-25148797 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 62, 21

Conread position: 1-165
Cow position: chr17:34958215-34958044 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 55, 21

Conread position: 1-165
Cow position: chr17:35884954-35884789 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 21

Conread position: 1-165
Cow position: chr17:37352773-37352932 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 21

Conread position: 1-165
Cow position: chr17:40682455-40682619 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 63, 21

Conread position: 1-166
Cow position: chr17:13267231-13267070 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 63, 18

Conread position: 1-270
Cow position: chr17:19125900-19126150 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 21

Conread position: 1-398
Cow position: chr17:17776208-17775825 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 21

Conread position: 1-417
Cow position: chr17:27786293-27785888 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 280
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 21

Conread position: 1-426
Cow position: chr17:21649464-21649048 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 291
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr17:1193006-1192590 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr17:1915908-1916329 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr17:3353715-3353298 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 285
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 61, 21

Conread position: 1-428
Cow position: chr17:6102753-6102330 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr17:7837203-7837614 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 298
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr17:28815374-28815789 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr17:36071480-36071895 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 21

Conread position: 1-428
Cow position: chr17:38868724-38868307 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 63, 21

Conread position: 1-433
Cow position: chr17:38599238-38598793 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 292
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 21

Conread position: 1-437
Cow position: chr17:21383234-21383659 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 298
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 21

Conread position: 2-165
Cow position: chr17:23829800-23829637 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 20

Conread position: 2-165
Cow position: chr17:24583750-24583591 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 17

Conread position: 2-178
Cow position: chr17:4555379-4555202 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 20

Conread position: 2-268
Cow position: chr17:3967158-3966894 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 20

Conread position: 3-166
Cow position: chr17:13633710-13633871 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 4-432
Cow position: chr17:8299164-8298725 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 8-269
Cow position: chr17:1034175-1033919 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 17

Conread position: 9-428
Cow position: chr17:21568234-21567801 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 16

Conread position: 10-426
Cow position: chr17:21041646-21041243 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 281
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 45, 10

Conread position: 11-164
Cow position: chr17:23804395-23804240 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 11-165
Cow position: chr17:5774368-5774522 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 16

Conread position: 12-164
Cow position: chr17:24989527-24989374 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 45

Conread position: 24-165
Cow position: chr17:12587624-12587765 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 100

Conread position: 24-165
Cow position: chr17:28810118-28810258 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 32

Conread position: 48-427
Cow position: chr17:40870575-40870205 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 119

Conread position: 192-436
Cow position: chr17:21386544-21386797 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 107

Conread position: 271-428
Cow position: chr17:3966597-3966439 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 32

Show alignments to all cow chromosomes.