Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               285
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               298
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               2-178
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               4-432
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               8-269
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               9-428
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               10-426
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               11-164
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               11-165
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               12-164
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               24-165
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               24-165
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               48-427
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               192-436
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 107
               

               Conread position:
               271-428
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 32
               
Show alignments to all cow chromosomes.