Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               298
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               292
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               267, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               2-178
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-377
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               2-412
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               4-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               9-163
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               9-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               9-450
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               11-164
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               11-270
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               12, 157
               

               Conread position:
               21-417
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               31-319
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 157
               

               Conread position:
               106-268
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               60, 120
               

               Conread position:
               189-428
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 104
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               88, 212
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 45
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               190-431
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 77
               
Show alignments to all cow chromosomes.