Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-142
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               297
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-448
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               2-163
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2-270
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-372
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               266, 20
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               165, 20
               

               Conread position:
               2-429
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               266, 20
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 18
               

               Conread position:
               4-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               130, 17
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               9-175
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               10-428
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 115
               

               Conread position:
               17-163
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 72
               

               Conread position:
               54-436
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               10, 58
               

               Conread position:
               190-433
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 37
               
Show alignments to all cow chromosomes.