Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-142 |
| Cow position: | chr19:37277107-37276968 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 1-165 |
| Cow position: | chr19:8551027-8551191 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:12053726-12053562 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:12066866-12067030 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:13227570-13227734 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:14480210-14480374 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:28446588-28446427 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:28944988-28944829 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:33082186-33082350 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:34066269-34066105 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-165 |
| Cow position: | chr19:42155834-42155670 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 1-165 |
| Cow position: | chr19:50550466-50550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 1-166 |
| Cow position: | chr19:11111827-11111992 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr19:11241515-11241350 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 1-166 |
| Cow position: | chr19:35641199-35641034 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 1-166 |
| Cow position: | chr19:53640256-53640091 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-269 |
| Cow position: | chr19:24985907-24986169 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 1-270 |
| Cow position: | chr19:2011732-2011472 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 1-428 |
| Cow position: | chr19:11209743-11210159 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 301 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 1-428 |
| Cow position: | chr19:11978708-11979124 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr19:14380311-14379894 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr19:28469233-28469650 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr19:28608844-28608430 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr19:30242522-30242108 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-428 |
| Cow position: | chr19:30251527-30251113 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-428 |
| Cow position: | chr19:33257746-33258163 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr19:45585453-45585863 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-429 |
| Cow position: | chr19:42246115-42246527 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-448 |
| Cow position: | chr19:38055258-38055692 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 2-163 |
| Cow position: | chr19:47874716-47874555 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 2-165 |
| Cow position: | chr19:50657974-50657813 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-270 |
| Cow position: | chr19:39753519-39753270 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 2-372 |
| Cow position: | chr19:27828358-27828715 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 2-428 |
| Cow position: | chr19:50677515-50677930 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 266, 20 |
| Conread position: | 2-428 |
| Cow position: | chr19:53533767-53533349 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 165, 20 |
| Conread position: | 2-429 |
| Cow position: | chr19:28436957-28437372 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 266, 20 |
| Conread position: | 3-165 |
| Cow position: | chr19:7700416-7700580 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-319 |
| Cow position: | chr19:21125584-21125279 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 4-428 |
| Cow position: | chr19:52332494-52332918 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 9-165 |
| Cow position: | chr19:27823748-27823903 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 9-175 |
| Cow position: | chr19:43751009-43750845 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 10-428 |
| Cow position: | chr19:43435113-43434704 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 17-163 |
| Cow position: | chr19:6485999-6485853 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 72 |
| Conread position: | 54-436 |
| Cow position: | chr19:7648045-7648416 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 190-433 |
| Cow position: | chr19:3930153-3929902 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 37 |
Show alignments to all cow chromosomes.