Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-255
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               146, 24
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-371
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               279, 16
               

               Conread position:
               1-420
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               301
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               298
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               298
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               261, 21
               

               Conread position:
               2-146
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-161
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               2-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               3-428
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               4-165
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               4-269
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               4-428
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               5-165
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               9-417
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               9-428
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               292
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               12-429
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               10, 44
               

               Conread position:
               24-165
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               58-428
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               207, 108
               

               Conread position:
               85-428
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               119-269
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               75, 97
               

               Conread position:
               202-430
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.