Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-161 |
| Cow position: | chr20:34102728-34102571 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-165 |
| Cow position: | chr20:4237631-4237473 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr20:5301596-5301754 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr20:5765881-5765717 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr20:14050963-14051126 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-165 |
| Cow position: | chr20:17527260-17527424 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr20:19249979-19250141 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-165 |
| Cow position: | chr20:24420178-24420013 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 1-165 |
| Cow position: | chr20:39657017-39656855 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-370 |
| Cow position: | chr20:26462926-26463281 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr20:793535-793119 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr20:2306730-2307146 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr20:20143610-20143193 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr20:26977761-26977344 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-429 |
| Cow position: | chr20:6880388-6879983 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 1-429 |
| Cow position: | chr20:36964034-36963618 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-444 |
| Cow position: | chr20:14801495-14801927 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 297 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 3-428 |
| Cow position: | chr20:2248478-2248893 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 3-431 |
| Cow position: | chr20:3494054-3494472 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 9-165 |
| Cow position: | chr20:17534241-17534397 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 9-417 |
| Cow position: | chr20:3546291-3546686 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 9-428 |
| Cow position: | chr20:16608916-16609322 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 11-165 |
| Cow position: | chr20:3542180-3542334 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 11-428 |
| Cow position: | chr20:2228368-2228781 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 24-165 |
| Cow position: | chr20:20142077-20142218 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 90 |
| Conread position: | 26-178 |
| Cow position: | chr20:27730734-27730581 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 33-173 |
| Cow position: | chr20:37207568-37207427 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 133, 0 |
Show alignments to all cow chromosomes.