Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-138 |
| Cow position: | chr23:9996585-9996448 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-164 |
| Cow position: | chr23:39011832-39011670 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr23:5240197-5240040 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-165 |
| Cow position: | chr23:6069878-6070039 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 1-165 |
| Cow position: | chr23:6214972-6214810 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-165 |
| Cow position: | chr23:18273261-18273097 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 1-165 |
| Cow position: | chr23:21991792-21991956 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr23:29125173-29125337 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 1-428 |
| Cow position: | chr23:8852673-8853090 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr23:9729397-9728977 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr23:37746541-37746959 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-430 |
| Cow position: | chr23:18863365-18863783 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 267, 21 |
| Conread position: | 1-432 |
| Cow position: | chr23:13632379-13631952 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 3-436 |
| Cow position: | chr23:25884911-25884479 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 303 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 9-428 |
| Cow position: | chr23:7522298-7522702 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 259, 13 |
| Conread position: | 12-165 |
| Cow position: | chr23:40369159-40369313 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 17-165 |
| Cow position: | chr23:23881894-23882034 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 5 |
| Conread position: | 116-428 |
| Cow position: | chr23:9996260-9995923 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 136-269 |
| Cow position: | chr23:5423218-5423353 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 84 |
Show alignments to all cow chromosomes.