Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               125, 21
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               168, 21
               

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-408
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-413
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               291
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               297
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               292
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               299
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               307
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-414
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-415
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               4-428
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               9-428
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               34-161
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               124-428
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               45, 198
               

               Conread position:
               135-319
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               36, 138
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               78, 109
               

               Conread position:
               263-421
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 8
               
Show alignments to all cow chromosomes.