Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-147 |
| Cow position: | chr25:18443445-18443590 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:4617095-4617259 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:10339324-10339486 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:11266269-11266103 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:13674968-13674805 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:13714237-13714073 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:14532425-14532261 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:20051560-20051396 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:23600237-23600401 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:30473817-30473653 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:32751453-32751615 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr25:36156896-36156732 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr25:10152577-10152411 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-166 |
| Cow position: | chr25:21141226-21141062 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr25:31979553-31979713 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr25:41238270-41238108 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 1-230 |
| Cow position: | chr25:10726710-10726934 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 168, 21 |
| Conread position: | 1-264 |
| Cow position: | chr25:14532842-14532597 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-408 |
| Cow position: | chr25:12664498-12664106 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-413 |
| Cow position: | chr25:29251677-29251273 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 1-417 |
| Cow position: | chr25:4624909-4625313 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-427 |
| Cow position: | chr25:34038706-34039117 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-428 |
| Cow position: | chr25:6276160-6275743 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr25:6918590-6918163 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 1-428 |
| Cow position: | chr25:7509101-7509514 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 291 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 1-428 |
| Cow position: | chr25:12244126-12244543 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 297 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr25:12250232-12250649 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr25:17373046-17373478 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr25:20259203-20258789 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 1-428 |
| Cow position: | chr25:22814227-22814642 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 1-428 |
| Cow position: | chr25:41131426-41131009 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-429 |
| Cow position: | chr25:11650796-11651214 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-436 |
| Cow position: | chr25:21519008-21518589 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 299 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-452 |
| Cow position: | chr25:6808372-6808813 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 2-261 |
| Cow position: | chr25:7489736-7489488 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 2-414 |
| Cow position: | chr25:6879575-6879176 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 2-415 |
| Cow position: | chr25:8624014-8624432 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 4-428 |
| Cow position: | chr25:5776823-5777240 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 9-165 |
| Cow position: | chr25:32677112-32677268 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 9-428 |
| Cow position: | chr25:3630843-3631252 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 34-161 |
| Cow position: | chr25:16134869-16134997 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 124-428 |
| Cow position: | chr25:5202504-5202812 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 198 |
| Conread position: | 135-319 |
| Cow position: | chr25:37620049-37619866 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 36, 138 |
| Conread position: | 190-428 |
| Cow position: | chr25:14532255-14532008 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 190-428 |
| Cow position: | chr25:36156726-36156479 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 109 |
| Conread position: | 263-421 |
| Cow position: | chr25:37619851-37619690 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 8 |
Show alignments to all cow chromosomes.