Cow genome map
| Conread name: | Tra1-TCH01A090068 |
| Conread position: | 1-132 |
| Cow position: | chr29:23475975-23475844 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-142 |
| Cow position: | chr29:3208360-3208500 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-165 |
| Cow position: | chr29:5099402-5099566 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-165 |
| Cow position: | chr29:20302106-20301942 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-165 |
| Cow position: | chr29:23374996-23375160 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr29:28846741-28846577 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 1-165 |
| Cow position: | chr29:39006511-39006672 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-165 |
| Cow position: | chr29:40312744-40312909 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-166 |
| Cow position: | chr29:34569097-34569260 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-379 |
| Cow position: | chr29:42986956-42986591 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-413 |
| Cow position: | chr29:38372151-38372549 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 287 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-417 |
| Cow position: | chr29:22103390-22102990 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 282 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr29:592866-593279 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr29:13860192-13860602 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr29:17348648-17348235 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-428 |
| Cow position: | chr29:31859666-31859250 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 1-430 |
| Cow position: | chr29:35767566-35767151 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 1-432 |
| Cow position: | chr29:29943808-29944228 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 2-164 |
| Cow position: | chr29:3348422-3348265 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-376 |
| Cow position: | chr29:12168389-12168769 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 2-428 |
| Cow position: | chr29:11403391-11402979 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 263, 20 |
| Conread position: | 9-207 |
| Cow position: | chr29:6147107-6147307 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 9-430 |
| Cow position: | chr29:5928227-5927822 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 262, 13 |
| Conread position: | 12-165 |
| Cow position: | chr29:8430331-8430484 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 24-427 |
| Cow position: | chr29:17450728-17450321 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 190-445 |
| Cow position: | chr29:43805810-43805551 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 77 |
| Conread position: | 237-423 |
| Cow position: | chr29:35329517-35329704 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 102, 50 |
Show alignments to all cow chromosomes.