Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 10
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               168, 24
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-373
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-414
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               284
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-417
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               293
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               293
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               299
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               274, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               303
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               267, 21
               

               Conread position:
               1-432
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               299
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               2-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               2-442
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               297
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               3-165
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               3-443
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               4-428
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               58, 13
               

               Conread position:
               9-165
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               9-166
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               10-428
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               54, 12
               

               Conread position:
               12-264
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               154, 48
               

               Conread position:
               12-428
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               23-428
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               24-166
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               24-178
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               39-429
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 130
               

               Conread position:
               184-428
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               190-417
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               75, 97
               

               Conread position:
               190-417
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 97
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 233
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               82, 218
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 97
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 97
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               190-429
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 61
               

               Conread position:
               190-433
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 97
               

               Conread position:
               191-429
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               264-429
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               271-426
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               43, 25
               
Show alignments to all cow chromosomes.