Cow genome map


           Conread name:
           Tra1-TCH01A090068
        

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               299
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               296
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               1-432
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               295
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               300
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               63, 7
               

               Conread position:
               2-417
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               284
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               2-426
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               2-428
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               243, 20
               

               Conread position:
               4-430
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               9-428
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               9-434
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               24-166
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 115
               

               Conread position:
               24-429
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 115
               

               Conread position:
               26-373
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               39, 116
               

               Conread position:
               190-427
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               190-427
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               190-428
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               75, 97
               
Show alignments to all cow chromosomes.