Cow genome map

Conread name: Tra1-TCH01A090068

Conread position: 1-162
Cow position: chr4:36162278-36162117 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 21

Conread position: 1-163
Cow position: chr4:35044534-35044372 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr4:10906951-10907114 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 1-165
Cow position: chr4:11259505-11259669 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr4:11737479-11737320 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-165
Cow position: chr4:16738218-16738382 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr4:16938331-16938489 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr4:30414821-30414984 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 18

Conread position: 1-165
Cow position: chr4:32835603-32835767 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr4:34268163-34267999 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr4:46952485-46952321 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 21

Conread position: 1-165
Cow position: chr4:52121045-52120883 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 21

Conread position: 1-165
Cow position: chr4:54860522-54860686 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 21

Conread position: 1-269
Cow position: chr4:46297417-46297163 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 21

Conread position: 1-372
Cow position: chr4:55322798-55322440 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr4:4717483-4717072 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 278
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr4:6262329-6262747 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 290
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 19

Conread position: 1-428
Cow position: chr4:12564084-12563667 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr4:14526380-14526797 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr4:22906920-22907335 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 296
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 63, 24

Conread position: 1-428
Cow position: chr4:31956641-31956225 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 64, 21

Conread position: 1-428
Cow position: chr4:35238998-35238581 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 21

Conread position: 1-428
Cow position: chr4:35552119-35552535 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 64, 21

Conread position: 1-428
Cow position: chr4:48555318-48555730 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 16

Conread position: 1-431
Cow position: chr4:30044753-30045167 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 16

Conread position: 1-432
Cow position: chr4:48842487-48842068 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 298
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 21

Conread position: 1-433
Cow position: chr4:5233810-5234230 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 295
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 63, 21

Conread position: 1-433
Cow position: chr4:43402448-43402026 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 294
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 21

Conread position: 1-433
Cow position: chr4:65584003-65583600 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 21

Conread position: 1-439
Cow position: chr4:9263026-9262600 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 300
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 64, 21

Conread position: 1-441
Cow position: chr4:45059104-45059533 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 302
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 63, 7

Conread position: 2-417
Cow position: chr4:14529213-14528811 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 284
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 62, 20

Conread position: 2-426
Cow position: chr4:17142114-17142509 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 284
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 20

Conread position: 2-428
Cow position: chr4:27763487-27763065 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 272
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 243, 20

Conread position: 4-430
Cow position: chr4:10382749-10383165 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 60, 18

Conread position: 9-428
Cow position: chr4:60136321-60136754 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 9-434
Cow position: chr4:18953669-18954084 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 55, 13

Conread position: 24-166
Cow position: chr4:45560677-45560534 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 115

Conread position: 24-429
Cow position: chr4:8195338-8195741 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 280
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 115

Conread position: 26-373
Cow position: chr4:32711590-32711961 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 116

Conread position: 190-427
Cow position: chr4:13487587-13487344 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 45

Conread position: 190-427
Cow position: chr4:20826872-20826626 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 190-428
Cow position: chr4:5495238-5495484 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 190-428
Cow position: chr4:12228736-12228489 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 97

Show alignments to all cow chromosomes.